Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP118-201ENST00000364331 330 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AL603865.2-201ENST00000401679 213 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MTCO1P43-201ENST00000431831 488 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 OR51P1P-201ENST00000447547 942 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC021074.2-201ENST00000468434 172 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 RPS4XP17-201ENST00000479057 754 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC010547.7-201ENST00000570323 333 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL32P-201ENST00000580514 281 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC124283.4-201ENST00000581815 456 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 IGLJCOR18-201ENST00000584002 424 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC007255.2-201ENST00000604053 631 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC017037.3-201ENST00000625016 472 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 Z98755.1-201ENST00000407015 1384 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 TRIM53CP-201ENST00000531490 1354 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 AC011815.2-201ENST00000618230 2021 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MROH3P-201ENST00000435735 2676 ntBASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RNFT1P3-201ENST00000340898 1052 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 SNORD116-1-201ENST00000384335 95 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP62-201ENST00000384539 329 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL079341.1-201ENST00000404701 1207 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 HMGB1P13-201ENST00000406019 642 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP205-201ENST00000410999 307 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 USP9YP11-201ENST00000427537 717 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL372P-201ENST00000461982 298 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL390P-201ENST00000470634 284 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL216P-201ENST00000471607 298 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC090589.1-201ENST00000473109 362 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC016687.1-201ENST00000482574 353 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RPS12P31-201ENST00000491419 398 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL350P-201ENST00000492591 299 ntBASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM48Q8IWZ4 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms