Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC008429.2-201ENST00000523057 864 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 TDGP1-201ENST00000543961 1229 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC025283.1-201ENST00000572039 734 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 RN7SL208P-201ENST00000577964 296 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 SYPL1P2-201ENST00000582878 727 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 NDUFB9P1-201ENST00000604683 510 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC004890.3-201ENST00000605566 1095 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 AC073488.9-201ENST00000631601 754 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 OR7E91P-202ENST00000642062 1198 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 CASC19-260ENST00000641828 2001 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 SAMM50P1-201ENST00000455403 1399 ntBASIC5.51□□□□□ -1.53
LRRC28Q86X40 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC28Q86X40 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LRRC28Q86X40 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 SNORA64.3-201ENST00000365647 134 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 NPM1P37-201ENST00000403105 874 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 MRPS21P2-201ENST00000424704 264 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC098818.1-201ENST00000478593 252 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 RPL19P11-201ENST00000495944 589 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 RN7SL284P-201ENST00000498823 275 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC131392.1-201ENST00000506490 633 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC093664.1-201ENST00000511779 289 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC124891.1-201ENST00000536322 519 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 RPL3P13-201ENST00000550415 216 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 SETP3-201ENST00000581726 813 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 MIR6889-201ENST00000613185 59 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 RNA5SP439-201ENST00000617595 124 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 MIR6823-201ENST00000622118 61 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 AC140479.2-201ENST00000421567 3130 ntBASIC5.5□□□□□ -1.53
LRRC28Q86X40 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LRRC28Q86X40 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC28Q86X40 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LRRC28Q86X40 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LRRC28Q86X40 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 AC005702.3-201ENST00000585345 1447 ntBASIC5.49□□□□□ -1.53
LRRC28Q86X40 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 SAGE3P-201ENST00000619800 1635 ntBASIC5.49□□□□□ -1.53
LRRC28Q86X40 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC28Q86X40 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC28Q86X40 RNA5SP485-201ENST00000365053 119 ntBASIC5.49□□□□□ -1.53
LRRC28Q86X40 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.49□□□□□ -1.53
LRRC28Q86X40 MIR433-201ENST00000384837 93 ntBASIC5.49□□□□□ -1.53
LRRC28Q86X40 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LRRC28Q86X40 RN7SKP221-201ENST00000410420 301 ntBASIC5.49□□□□□ -1.53
LRRC28Q86X40 AL360013.1-201ENST00000419031 858 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms