Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AC103703.1-201ENST00000634783 663 ntBASIC7.41□□□□□ -1.22
RFX7Q2KHR2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
RFX7Q2KHR2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RBMY1HP-201ENST00000382759 1389 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC016583.1-201ENST00000624221 2431 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RNFT1P3-201ENST00000340898 1052 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RN7SKP78-201ENST00000364711 318 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RN7SKP166-201ENST00000410812 305 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 ATP5LP2-201ENST00000440646 311 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AL391987.1-201ENST00000441025 200 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 PPIAP20-201ENST00000449839 135 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 RPA2P1-201ENST00000556557 721 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AP005119.1-201ENST00000580956 292 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC119403.2-201ENST00000590960 598 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC008521.2-201ENST00000591021 259 ntBASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX7Q2KHR2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 AC107980.1-201ENST00000558671 3355 ntBASIC7.4□□□□□ -1.23
RFX7Q2KHR2 AC022325.1-201ENST00000502748 2199 ntBASIC7.4□□□□□ -1.23
RFX7Q2KHR2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 OLMALINC-203ENST00000641087 3779 ntBASIC7.4□□□□□ -1.23
RFX7Q2KHR2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
RFX7Q2KHR2 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AL137918.1-201ENST00000624542 1922 ntBASIC7.39□□□□□ -1.23
RFX7Q2KHR2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 RN7SKP292-201ENST00000365522 317 ntBASIC7.39□□□□□ -1.23
RFX7Q2KHR2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CHEK2P5-201ENST00000423877 246 ntBASIC7.39□□□□□ -1.23
RFX7Q2KHR2 GAPDHP75-201ENST00000433910 943 ntBASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 AL136228.1-201ENST00000622221 319 ntBASIC7.39□□□□□ -1.23
RFX7Q2KHR2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX7Q2KHR2 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 RNA5SP284-201ENST00000384547 118 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AL132875.1-201ENST00000403623 949 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AL512422.1-201ENST00000407033 553 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 RNA5SP156-201ENST00000410250 110 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC098847.1-201ENST00000473094 348 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC007998.1-201ENST00000474156 672 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 RPL7P51-201ENST00000490532 749 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 RN7SL193P-201ENST00000491708 276 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms