Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CX3CL1P78423 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CL1P78423 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CL1P78423 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC006213.6-201ENST00000623722 4179 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 NAMPTP1-201ENST00000440465 2514 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC005332.9-201ENST00000620266 2921 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CX3CL1P78423 OR7A2P-201ENST00000304105 930 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 U3.52-201ENST00000384034 216 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 CCNB2P1-201ENST00000399411 1150 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AL023284.3-201ENST00000407767 334 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 UBE2V1P15-201ENST00000407776 448 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AL357078.2-201ENST00000416486 427 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 WDR82P2-201ENST00000444540 928 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 RN7SL83P-201ENST00000468131 297 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 RPL23AP64-201ENST00000469465 435 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 RPS4XP17-201ENST00000479057 754 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC022415.1-202ENST00000486612 523 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 RPL19P11-201ENST00000495944 589 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC105420.1-201ENST00000504389 582 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC131392.1-201ENST00000506490 633 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 OR4V1P-201ENST00000525394 1140 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC084851.2-201ENST00000530377 364 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 AL121839.1-201ENST00000556233 1185 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 LINC00557-201ENST00000563184 1279 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AL078623.1-201ENST00000602702 907 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC007423.1-201ENST00000605009 627 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AC022001.1-201ENST00000605193 268 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 AC006453.5-201ENST00000636451 619 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 AL121936.2-201ENST00000641935 662 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 FANCD2P2-201ENST00000437591 1400 ntBASIC5.19□□□□□ -1.58
CX3CL1P78423 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CL1P78423 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CX3CL1P78423 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CL1P78423 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
CX3CL1P78423 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CX3CL1P78423 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CL1P78423 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CL1P78423 AC010624.4-201ENST00000597606 1351 ntBASIC5.18□□□□□ -1.58
CX3CL1P78423 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CL1P78423 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CX3CL1P78423 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CL1P78423 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms