Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.38□□□□□ -1.71
CKS1BP61024 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.38□□□□□ -1.71
CKS1BP61024 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.38□□□□□ -1.71
CKS1BP61024 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CKS1BP61024 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.38□□□□□ -1.71
CKS1BP61024 RBPJP2-201ENST00000618187 1444 ntBASIC4.38□□□□□ -1.71
CKS1BP61024 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 THAP12P8-201ENST00000447914 2115 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CKS1BP61024 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 OR55B1P-203ENST00000641518 2602 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 RN7SKP286-201ENST00000410894 299 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 NPM1P40-201ENST00000412758 733 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.37□□□□□ -1.71
CKS1BP61024 AL158827.1-201ENST00000416300 391 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 SPATA20P1-201ENST00000423089 438 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AL357632.1-201ENST00000426688 643 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC097721.1-201ENST00000427150 1253 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AL590128.1-201ENST00000433407 286 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC083855.1-201ENST00000440041 258 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.37□□□□□ -1.71
CKS1BP61024 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 RPL23AP28-201ENST00000448062 470 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 OR52I1-201ENST00000450052 1050 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 SNX18P26-201ENST00000458433 740 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC018475.1-201ENST00000478358 465 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 RN7SL445P-201ENST00000495609 293 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 RNA5SP230-201ENST00000517039 122 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 IGKV2D-38-201ENST00000518423 240 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 PVT1-214ENST00000522875 922 ntTSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC140063.1-201ENST00000541343 259 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 MIR378C-201ENST00000578683 81 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 AC233702.7-202ENST00000582941 211 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 DIMT1P1-201ENST00000603970 763 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 AP001264.1-201ENST00000620602 703 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 MRPL57P1-201ENST00000621486 265 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC114546.4-201ENST00000624413 369 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC073857.1-201ENST00000625082 1054 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 SNORA16A-202ENST00000628458 135 ntBASIC4.37□□□□□ -1.71
CKS1BP61024 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CKS1BP61024 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CKS1BP61024 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.37□□□□□ -1.71
CKS1BP61024 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CKS1BP61024 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 SHQ1P1-201ENST00000437111 1544 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 Z95331.1-201ENST00000623075 23112 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms