Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.49□□□□□ -1.21
RHBDL3P58872 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 SNORA21-201ENST00000362423 132 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 RNU1-49P-201ENST00000363468 159 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RHBDL3P58872 MIR640-201ENST00000385086 96 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 AL607077.1-201ENST00000401718 499 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 SEPT7P8-201ENST00000413308 775 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 MTCO1P57-201ENST00000432182 261 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 RAB28P3-201ENST00000448325 597 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 AC023194.2-201ENST00000465398 406 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 AC022336.1-201ENST00000475510 337 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.49□□□□□ -1.21
RHBDL3P58872 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AC013731.1-201ENST00000604340 883 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.49□□□□□ -1.21
RHBDL3P58872 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.49□□□□□ -1.21
RHBDL3P58872 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RHBDL3P58872 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RHBDL3P58872 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.49□□□□□ -1.21
RHBDL3P58872 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RHBDL3P58872 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RHBDL3P58872 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AL359976.1-201ENST00000418655 3528 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RHBDL3P58872 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.48□□□□□ -1.21
RHBDL3P58872 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AL353625.1-202ENST00000366273 571 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 RN7SKP144-201ENST00000411108 279 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 TRIM60P17-201ENST00000415181 719 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 NME1P1-201ENST00000420914 382 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 AC130360.1-201ENST00000425489 1117 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 CR383658.1-201ENST00000514609 734 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC130365.2-201ENST00000525882 1201 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC027243.2-201ENST00000602530 724 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 FO681491.1-202ENST00000623392 737 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 AL132640.3-201ENST00000630473 177 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.48□□□□□ -1.21
RHBDL3P58872 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 AC087565.3-202ENST00000642085 1603 ntBASIC7.48□□□□□ -1.21
RHBDL3P58872 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RHBDL3P58872 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC027279.1-201ENST00000568885 4284 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.47□□□□□ -1.21
RHBDL3P58872 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 RNU6-618P-201ENST00000363518 112 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms