Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC134879.1-201ENST00000426062 394 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 GAPDHP34-201ENST00000432112 823 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 ISCA1P2-201ENST00000438679 421 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 RPL36AP55-201ENST00000454114 305 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 CDC42P1-201ENST00000456658 548 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 PABPC1P10-201ENST00000464731 381 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AC026336.1-201ENST00000466577 351 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 BZW1P2-201ENST00000473537 826 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC090058.1-201ENST00000498788 435 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 MTND5P13-201ENST00000513046 1079 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 PRELID3BP4-201ENST00000515476 571 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 OR7E161P-201ENST00000533722 967 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.52□□□□□ -1.37
GFRA1P56159 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC023080.1-201ENST00000551663 931 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AC015801.1-201ENST00000585651 153 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC092960.1-201ENST00000604762 351 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AL392112.1-201ENST00000605115 829 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 AL353600.1-201ENST00000608148 251 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 AC130456.6-201ENST00000623745 765 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 AC243725.1-201ENST00000637164 436 ntBASIC6.52□□□□□ -1.37
GFRA1P56159 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.52□□□□□ -1.37
GFRA1P56159 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GFRA1P56159 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.52□□□□□ -1.37
GFRA1P56159 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GFRA1P56159 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.52□□□□□ -1.37
GFRA1P56159 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
GFRA1P56159 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GFRA1P56159 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AL139805.2-201ENST00000455305 2433 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 SEC63P2-201ENST00000503863 1939 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 RNU6-304P-201ENST00000364855 107 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 RNA5SP35-201ENST00000391257 129 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 RPL24P7-201ENST00000399435 453 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 GSTA8P-201ENST00000404253 637 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC005517.1-201ENST00000452091 489 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 RN7SL149P-201ENST00000465197 281 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 LINC00888-204ENST00000487386 421 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.51□□□□□ -1.37
GFRA1P56159 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC008967.1-201ENST00000504843 163 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 MTCO3P7-201ENST00000510008 774 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 PDCL3P1-201ENST00000534575 734 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms