Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.92□□□□□ -1.46
CENPAP49450 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CENPAP49450 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 AC016745.2-201ENST00000608834 3443 ntBASIC5.91□□□□□ -1.46
CENPAP49450 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 AC068446.1-201ENST00000556425 1549 ntBASIC5.91□□□□□ -1.46
CENPAP49450 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 MIR99A-201ENST00000384906 81 ntBASIC5.91□□□□□ -1.46
CENPAP49450 UBBP1-201ENST00000392399 473 ntBASIC5.91□□□□□ -1.46
CENPAP49450 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 LDHAP5-201ENST00000394996 622 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AL359694.1-201ENST00000403247 604 ntBASIC5.91□□□□□ -1.46
CENPAP49450 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.91□□□□□ -1.46
CENPAP49450 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 AC024937.2-201ENST00000411669 1242 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 GNG5P5-201ENST00000420444 220 ntBASIC5.91□□□□□ -1.46
CENPAP49450 ARAFP1-201ENST00000422172 605 ntBASIC5.91□□□□□ -1.46
CENPAP49450 FDPSP6-201ENST00000425091 512 ntBASIC5.91□□□□□ -1.46
CENPAP49450 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CENPAP49450 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.91□□□□□ -1.46
CENPAP49450 RPL10P7-201ENST00000495649 625 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.91□□□□□ -1.46
CENPAP49450 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 AC114940.1-201ENST00000512162 1265 ntBASIC5.91□□□□□ -1.46
CENPAP49450 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 SETP12-201ENST00000514068 805 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC117525.1-201ENST00000515228 503 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 NPM1P52-201ENST00000518264 846 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AP005902.2-201ENST00000518393 307 ntBASIC5.91□□□□□ -1.46
CENPAP49450 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 ANP32BP1-202ENST00000568553 737 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.91□□□□□ -1.46
CENPAP49450 AC011497.2-201ENST00000600255 639 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AL158211.2-201ENST00000607282 395 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 AL451049.1-201ENST00000608672 497 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC084036.1-201ENST00000609190 508 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC006328.2-201ENST00000623198 397 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC015660.5-201ENST00000623238 564 ntBASIC5.91□□□□□ -1.46
CENPAP49450 FO681491.1-202ENST00000623392 737 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC012005.2-201ENST00000624333 397 ntBASIC5.91□□□□□ -1.46
CENPAP49450 AC114546.4-201ENST00000624413 369 ntBASIC5.91□□□□□ -1.46
CENPAP49450 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.91□□□□□ -1.46
CENPAP49450 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
CENPAP49450 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CENPAP49450 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.91□□□□□ -1.46
CENPAP49450 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CENPAP49450 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.9□□□□□ -1.46
CENPAP49450 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CENPAP49450 MTCO1P15-201ENST00000529569 1526 ntBASIC5.9□□□□□ -1.46
CENPAP49450 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CENPAP49450 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CENPAP49450 SNORA38B-201ENST00000363524 131 ntBASIC5.9□□□□□ -1.46
CENPAP49450 SNORD8-201ENST00000363915 110 ntBASIC5.9□□□□□ -1.46
CENPAP49450 UBE2V1P15-201ENST00000407776 448 ntBASIC5.9□□□□□ -1.46
CENPAP49450 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.9□□□□□ -1.46
CENPAP49450 AC000089.1-201ENST00000424559 801 ntBASIC5.9□□□□□ -1.46
CENPAP49450 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.9□□□□□ -1.46
CENPAP49450 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.9□□□□□ -1.46
CENPAP49450 GAPDHP20-201ENST00000444107 1007 ntBASIC5.9□□□□□ -1.46
CENPAP49450 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.9□□□□□ -1.46
CENPAP49450 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CENPAP49450 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CENPAP49450 VN1R38P-201ENST00000450265 887 ntBASIC5.9□□□□□ -1.46
CENPAP49450 RN7SL149P-201ENST00000465197 281 ntBASIC5.9□□□□□ -1.46
CENPAP49450 AC022415.1-202ENST00000486612 523 ntBASIC5.9□□□□□ -1.46
CENPAP49450 NPM1P27-201ENST00000502784 830 ntBASIC5.9□□□□□ -1.46
CENPAP49450 AC008628.1-201ENST00000508663 265 ntBASIC5.9□□□□□ -1.46
CENPAP49450 AC010442.1-201ENST00000515583 816 ntBASIC5.9□□□□□ -1.46
CENPAP49450 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.9□□□□□ -1.46
CENPAP49450 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.9□□□□□ -1.46
CENPAP49450 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms