Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 AC022893.2-201ENST00000564832 3296 ntBASIC8.54□□□□□ -1.04
CPS1P31327 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 RN7SKP128-201ENST00000364270 303 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AC005042.1-201ENST00000393397 800 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.54□□□□□ -1.04
CPS1P31327 RPL35AP19-201ENST00000469425 329 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AC100832.1-201ENST00000471945 383 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.54□□□□□ -1.04
CPS1P31327 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 AC005840.5-201ENST00000619166 599 ntBASIC8.54□□□□□ -1.04
CPS1P31327 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 CASC19-205ENST00000641013 1411 ntBASIC8.54□□□□□ -1.04
CPS1P31327 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.53□□□□□ -1.04
CPS1P31327 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
CPS1P31327 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
CPS1P31327 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.53□□□□□ -1.04
CPS1P31327 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
CPS1P31327 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.53□□□□□ -1.04
CPS1P31327 RPL35AP24-201ENST00000413846 330 ntBASIC8.53□□□□□ -1.04
CPS1P31327 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.53□□□□□ -1.04
CPS1P31327 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.53□□□□□ -1.04
CPS1P31327 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.53□□□□□ -1.04
CPS1P31327 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 AC103563.5-201ENST00000455643 364 ntBASIC8.53□□□□□ -1.04
CPS1P31327 AC093166.4-201ENST00000457867 318 ntBASIC8.53□□□□□ -1.04
CPS1P31327 RPS29P22-201ENST00000472363 168 ntBASIC8.53□□□□□ -1.04
CPS1P31327 RN7SL57P-201ENST00000493687 290 ntBASIC8.53□□□□□ -1.04
CPS1P31327 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.53□□□□□ -1.04
CPS1P31327 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.53□□□□□ -1.04
CPS1P31327 AL049872.1-201ENST00000556323 322 ntBASIC8.53□□□□□ -1.04
CPS1P31327 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CPS1P31327 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CPS1P31327 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.53□□□□□ -1.04
CPS1P31327 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CPS1P31327 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.53□□□□□ -1.04
CPS1P31327 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
CPS1P31327 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CPS1P31327 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
CPS1P31327 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
CPS1P31327 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CPS1P31327 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CPS1P31327 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CPS1P31327 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 AL109941.1-201ENST00000401925 229 ntBASIC8.52□□□□□ -1.05
CPS1P31327 RPS15AP30-201ENST00000420976 390 ntBASIC8.52□□□□□ -1.05
CPS1P31327 NMD3P2-201ENST00000421815 761 ntBASIC8.52□□□□□ -1.05
CPS1P31327 AL139415.1-201ENST00000424862 352 ntBASIC8.52□□□□□ -1.05
CPS1P31327 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.52□□□□□ -1.05
CPS1P31327 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.52□□□□□ -1.05
CPS1P31327 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.52□□□□□ -1.05
CPS1P31327 OR7E116P-201ENST00000448529 957 ntBASIC8.52□□□□□ -1.05
CPS1P31327 AURKAPS1-201ENST00000451805 1212 ntBASIC8.52□□□□□ -1.05
CPS1P31327 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.52□□□□□ -1.05
CPS1P31327 NRBF2P4-201ENST00000520874 850 ntBASIC8.52□□□□□ -1.05
CPS1P31327 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.52□□□□□ -1.05
CPS1P31327 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 MIR378J-201ENST00000611988 109 ntBASIC8.52□□□□□ -1.05
CPS1P31327 AL359513.1-201ENST00000614364 557 ntBASIC8.52□□□□□ -1.05
CPS1P31327 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.52□□□□□ -1.05
CPS1P31327 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.52□□□□□ -1.05
CPS1P31327 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.52□□□□□ -1.05
CPS1P31327 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 AC105235.1-201ENST00000623208 1816 ntBASIC8.52□□□□□ -1.05
CPS1P31327 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.52□□□□□ -1.05
CPS1P31327 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CPS1P31327 MAPK10-323ENST00000641493 3207 ntBASIC8.51□□□□□ -1.05
CPS1P31327 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CPS1P31327 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CPS1P31327 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CPS1P31327 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms