Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.54□□□□□ -1.2
CNGA1P29973 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CNGA1P29973 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.54□□□□□ -1.2
CNGA1P29973 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.54□□□□□ -1.2
CNGA1P29973 ZNF965P-201ENST00000432501 817 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 MED28P4-201ENST00000433137 572 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.54□□□□□ -1.2
CNGA1P29973 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC007000.2-201ENST00000442564 487 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AL020997.1-201ENST00000446554 349 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 CABYRP1-201ENST00000465493 1045 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC104109.1-201ENST00000498563 436 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC093763.2-201ENST00000505334 1223 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC016550.1-201ENST00000505348 785 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.54□□□□□ -1.2
CNGA1P29973 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.54□□□□□ -1.2
CNGA1P29973 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 AC126365.2-201ENST00000580630 379 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC135178.6-201ENST00000605314 398 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 AC018690.1-201ENST00000608144 626 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC022306.3-201ENST00000619930 550 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CNGA1P29973 ABCA11P-202ENST00000504019 2110 ntBASIC7.54□□□□□ -1.2
CNGA1P29973 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CNGA1P29973 AC119674.1-202ENST00000641333 1860 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.53□□□□□ -1.2
CNGA1P29973 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.53□□□□□ -1.2
CNGA1P29973 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 AC008753.1-201ENST00000423096 284 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.53□□□□□ -1.2
CNGA1P29973 RPS29P14-201ENST00000431518 171 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.53□□□□□ -1.2
CNGA1P29973 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.53□□□□□ -1.2
CNGA1P29973 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.53□□□□□ -1.2
CNGA1P29973 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.53□□□□□ -1.2
CNGA1P29973 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.53□□□□□ -1.2
CNGA1P29973 HMGN1P17-201ENST00000513734 295 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.53□□□□□ -1.2
CNGA1P29973 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.53□□□□□ -1.2
CNGA1P29973 RPL3P13-201ENST00000550415 216 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AC005632.2-201ENST00000564271 828 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AC002519.2-203ENST00000567043 837 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.53□□□□□ -1.2
CNGA1P29973 AC245052.7-201ENST00000601161 359 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 AC012213.4-201ENST00000606457 354 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 CR589904.2-201ENST00000612533 440 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.53□□□□□ -1.2
CNGA1P29973 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.53□□□□□ -1.2
CNGA1P29973 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.53□□□□□ -1.2
CNGA1P29973 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.53□□□□□ -1.2
CNGA1P29973 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.53□□□□□ -1.2
CNGA1P29973 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CNGA1P29973 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CNGA1P29973 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CNGA1P29973 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.52□□□□□ -1.2
CNGA1P29973 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.52□□□□□ -1.2
CNGA1P29973 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CNGA1P29973 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CNGA1P29973 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CNGA1P29973 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.52□□□□□ -1.21
CNGA1P29973 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CNGA1P29973 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.52□□□□□ -1.21
CNGA1P29973 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CNGA1P29973 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CNGA1P29973 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CNGA1P29973 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.52□□□□□ -1.21
CNGA1P29973 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CNGA1P29973 RNA5SP198-201ENST00000410376 127 ntBASIC7.52□□□□□ -1.21
CNGA1P29973 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.52□□□□□ -1.21
CNGA1P29973 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms