Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SKP237-201ENST00000364663 301 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC007068.1-201ENST00000396690 844 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 PSMA6P1-201ENST00000400275 741 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 RPS7P14-201ENST00000426405 583 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC079922.1-201ENST00000443291 359 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 RPS27AP3-201ENST00000453803 454 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 RN7SL568P-201ENST00000493069 298 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 GUSBP9-201ENST00000510138 584 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 Vault.2-201ENST00000516519 98 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 RNA5SP206-201ENST00000516703 121 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC027229.1-201ENST00000583887 253 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AP003400.2-201ENST00000624036 666 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AC116667.2-201ENST00000641075 823 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AL353763.1-201ENST00000624467 1628 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AOX3P-204ENST00000491025 2107 ntBASIC6.31□□□□□ -1.4
HLA-DPA1P20036 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DPA1P20036 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CCNT2P1-201ENST00000423082 1315 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL157702.1-201ENST00000398764 426 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 MTND2P12-201ENST00000417560 1252 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 RPSAP32-201ENST00000432681 526 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC094019.1-201ENST00000434678 472 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 RPL5P16-201ENST00000471467 790 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 OR4A40P-201ENST00000533878 948 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AP001858.2-201ENST00000536213 601 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC090115.2-201ENST00000548060 883 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 NPIPB1P-202ENST00000588786 828 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 WBP1LP12-201ENST00000604449 331 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL713998.2-201ENST00000604538 1198 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC012676.3-201ENST00000614983 479 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AP000550.3-201ENST00000637734 379 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC010325.3-201ENST00000641084 394 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 MAPK10-350ENST00000641777 965 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 AC093909.5-201ENST00000621839 1799 ntBASIC6.3□□□□□ -1.4
HLA-DPA1P20036 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DPA1P20036 DDX18P6-201ENST00000450119 1997 ntBASIC6.29□□□□□ -1.4
HLA-DPA1P20036 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms