Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC130P13994 AC009879.1-201ENST00000520029 839 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC130P13994 AC021269.1-201ENST00000526860 705 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 AP001804.1-201ENST00000526868 919 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 AP000620.1-201ENST00000527147 504 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 RPA2P3-201ENST00000533268 770 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC130P13994 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC130P13994 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC130P13994 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC130P13994 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 AC002519.2-203ENST00000567043 837 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 RNU4ATAC-201ENST00000580972 127 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC130P13994 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 MIR6071-201ENST00000616741 78 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 AL512652.1-201ENST00000619006 500 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC130P13994 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC130P13994 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC130P13994 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 XKRY2-202ENST00000623874 1581 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 XKRY-202ENST00000624960 1581 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC130P13994 AC024651.2-201ENST00000562480 2098 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC130P13994 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC130P13994 AP004289.1-201ENST00000436307 2205 ntBASIC6.56□□□□□ -1.36
CCDC130P13994 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC130P13994 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC130P13994 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC130P13994 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC130P13994 AL451046.1-201ENST00000406097 534 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 RN7SKP161-201ENST00000411110 305 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC130P13994 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC130P13994 AL022237.1-201ENST00000446663 358 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 OR52E7P-201ENST00000452394 933 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC130P13994 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CCDC130P13994 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC130P13994 AC134669.1-201ENST00000581275 672 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 MIR4271-201ENST00000582451 67 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 NPIPB1P-202ENST00000588786 828 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AC008555.7-201ENST00000605008 583 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AL021368.3-201ENST00000607119 578 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AC073389.3-201ENST00000609434 935 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AL137067.2-201ENST00000621202 131 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC130P13994 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 AC005225.5-201ENST00000623547 2225 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 IFIT1P1-201ENST00000400497 1449 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 AC011416.1-201ENST00000514947 1732 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.55□□□□□ -1.36
CCDC130P13994 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 AL354854.1-201ENST00000455940 1363 ntBASIC6.55□□□□□ -1.36
CCDC130P13994 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC130P13994 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC130P13994 AC104966.1-201ENST00000467010 1464 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC130P13994 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC130P13994 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC130P13994 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC130P13994 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC130P13994 OR7E156P-201ENST00000400303 464 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 AL132875.1-201ENST00000403623 949 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC130P13994 KATNBL1P2-201ENST00000433311 835 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 PNKDP1-201ENST00000435914 430 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC130P13994 AC002553.3-201ENST00000453002 341 ntBASIC6.54□□□□□ -1.36
CCDC130P13994 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC130P13994 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC130P13994 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC130P13994 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC130P13994 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms