Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 ST13P2-201ENST00000438916 1109 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC010878.1-201ENST00000456500 1047 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 RN7SL91P-201ENST00000469313 291 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 RN7SL815P-201ENST00000470970 290 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AP000805.1-201ENST00000471604 784 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AL591122.1-201ENST00000487348 492 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 RN7SL561P-201ENST00000488553 281 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 RN7SL182P-201ENST00000496499 300 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 TECRP2-201ENST00000503270 928 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC113420.1-201ENST00000507903 571 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 HAUS1P3-201ENST00000523909 662 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AP001803.1-201ENST00000525668 147 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.81□□□□□ -1.32
COL6A2P12110 TDGP1-201ENST00000543961 1229 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 DPPA3P2-202ENST00000557188 1219 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.81□□□□□ -1.32
COL6A2P12110 MIR4786-201ENST00000583954 80 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.81□□□□□ -1.32
COL6A2P12110 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC125232.1-201ENST00000452554 1408 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC120338.1-201ENST00000625074 1541 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 AL391261.1-201ENST00000555712 1479 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL6A2P12110 FUNDC2P3-201ENST00000334716 533 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.8□□□□□ -1.32
COL6A2P12110 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 RPS3AP5-201ENST00000389400 821 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 HMGB1P13-201ENST00000406019 642 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.8□□□□□ -1.32
COL6A2P12110 RN7SKP148-201ENST00000410179 275 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 CCRL1P1-201ENST00000449542 1053 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC004692.1-201ENST00000455430 424 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 TPTE2P5-203ENST00000458118 728 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.8□□□□□ -1.32
COL6A2P12110 RN7SL382P-201ENST00000482631 282 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 EIF4E2P2-201ENST00000492033 736 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 RPL21P131-201ENST00000497298 483 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 SUMO1P1-201ENST00000497904 306 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 MTND1P22-201ENST00000510572 951 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 OR5M4P-201ENST00000529436 925 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC007537.1-201ENST00000539347 327 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.8□□□□□ -1.32
COL6A2P12110 TTC41P-205ENST00000551270 3963 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 AC026458.1-201ENST00000564330 438 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC106734.1-201ENST00000568646 663 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 EIF4A3P1-201ENST00000578499 647 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.8□□□□□ -1.32
COL6A2P12110 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL6A2P12110 AC107952.2-201ENST00000606048 486 ntBASIC6.8□□□□□ -1.32
COL6A2P12110 AC245008.1-201ENST00000608123 476 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms