Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 NANOGNBP2-201ENST00000544753 553 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC073916.1-201ENST00000545095 130 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC091948.2-201ENST00000636510 279 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 PARP4P1-201ENST00000435945 2337 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 TNPO1P2-201ENST00000426249 2665 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 MAPK10-287ENST00000641217 3037 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC092111.1-201ENST00000618256 3358 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC008627.1-201ENST00000517511 1704 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 RNA5SP435-201ENST00000364044 108 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC092642.1-201ENST00000392417 425 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 RPL35AP31-201ENST00000418340 337 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC016908.1-201ENST00000442571 1219 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 CFL1P4-201ENST00000451536 498 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC084754.1-201ENST00000463466 464 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC060775.1-201ENST00000518241 520 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 RPA2P1-201ENST00000556557 721 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AP005131.7-201ENST00000610087 611 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 FO681491.1-202ENST00000623392 737 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC073488.3-201ENST00000631611 778 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 MAPK10-323ENST00000641493 3207 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AL133243.4-201ENST00000623116 3109 ntBASIC7.35□□□□□ -1.23
HLA-DOAP06340 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HLA-DOAP06340 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.35□□□□□ -1.23
HLA-DOAP06340 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 SNORA43.1-201ENST00000364863 140 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 CASKP1-201ENST00000412870 582 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 RPS3P2-201ENST00000421346 701 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 NFYAP1-201ENST00000431953 972 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 HSFY7P-201ENST00000432672 318 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 HSFY8P-201ENST00000437934 318 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 GAPDHP23-201ENST00000444823 993 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 HSFY5P-201ENST00000453726 309 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HLA-DOAP06340 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC026254.2-201ENST00000475295 371 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 RNA5SP434-201ENST00000516647 121 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 RNA5SP400-201ENST00000517155 111 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC092865.1-201ENST00000544395 1023 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC020978.7-201ENST00000575953 1187 ntBASIC7.34□□□□□ -1.23
HLA-DOAP06340 AC023389.2-201ENST00000580031 955 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms