Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P04436 CDY5P-201ENST00000411487 1580 ntBASIC5.67□□□□□ -1.5
P04436 CDY9P-201ENST00000451397 1580 ntBASIC5.67□□□□□ -1.5
P04436 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
P04436 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
P04436 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P04436 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
P04436 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
P04436 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.66□□□□□ -1.5
P04436 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 AL391261.1-201ENST00000555712 1479 ntBASIC5.66□□□□□ -1.5
P04436 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.66□□□□□ -1.5
P04436 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
P04436 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
P04436 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
P04436 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.66□□□□□ -1.5
P04436 SEPT14P12-201ENST00000442280 560 ntBASIC5.66□□□□□ -1.5
P04436 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.66□□□□□ -1.5
P04436 GAPDHP23-201ENST00000444823 993 ntBASIC5.66□□□□□ -1.5
P04436 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
P04436 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.66□□□□□ -1.5
P04436 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 RN7SKP35-201ENST00000517210 151 ntBASIC5.66□□□□□ -1.5
P04436 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 KCTD9P4-201ENST00000526766 1166 ntBASIC5.66□□□□□ -1.5
P04436 RPA2P3-201ENST00000533268 770 ntBASIC5.66□□□□□ -1.5
P04436 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.66□□□□□ -1.5
P04436 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 AC105036.1-201ENST00000566222 271 ntBASIC5.66□□□□□ -1.5
P04436 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.66□□□□□ -1.5
P04436 AL138895.2-201ENST00000603019 178 ntBASIC5.66□□□□□ -1.5
P04436 AL591167.1-201ENST00000607321 456 ntBASIC5.66□□□□□ -1.5
P04436 RN7SL261P-201ENST00000613441 282 ntBASIC5.66□□□□□ -1.5
P04436 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.66□□□□□ -1.5
P04436 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 AC073342.2-201ENST00000595842 1800 ntBASIC5.66□□□□□ -1.5
P04436 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.66□□□□□ -1.5
P04436 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
P04436 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.66□□□□□ -1.5
P04436 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.66□□□□□ -1.5
P04436 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P04436 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
P04436 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
P04436 AC018717.1-201ENST00000457712 1505 ntBASIC5.65□□□□□ -1.5
P04436 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P04436 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P04436 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.5
P04436 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 SNORA51.9-201ENST00000384295 124 ntBASIC5.65□□□□□ -1.5
P04436 RNU6-316P-201ENST00000391027 107 ntBASIC5.65□□□□□ -1.5
P04436 MIR1282-201ENST00000408865 101 ntBASIC5.65□□□□□ -1.5
P04436 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 AC010740.1-201ENST00000417035 684 ntBASIC5.65□□□□□ -1.5
P04436 RPL35AP31-201ENST00000418340 337 ntBASIC5.65□□□□□ -1.5
P04436 KCTD9P1-201ENST00000430462 1167 ntBASIC5.65□□□□□ -1.5
P04436 AL353662.1-201ENST00000439099 327 ntBASIC5.65□□□□□ -1.5
P04436 ATP5LP2-201ENST00000440646 311 ntBASIC5.65□□□□□ -1.5
P04436 RPS10P18-201ENST00000442662 495 ntBASIC5.65□□□□□ -1.5
P04436 AL355355.1-201ENST00000442900 793 ntBASIC5.65□□□□□ -1.5
P04436 PPIAP27-201ENST00000453800 265 ntBASIC5.65□□□□□ -1.5
P04436 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.65□□□□□ -1.5
P04436 CR383658.1-201ENST00000514609 734 ntBASIC5.65□□□□□ -1.5
P04436 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 AC021269.1-201ENST00000526860 705 ntBASIC5.65□□□□□ -1.5
P04436 AP003396.4-201ENST00000527574 265 ntBASIC5.65□□□□□ -1.5
P04436 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
P04436 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.65□□□□□ -1.5
P04436 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.65□□□□□ -1.5
P04436 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.65□□□□□ -1.5
P04436 AC018690.1-201ENST00000608144 626 ntBASIC5.65□□□□□ -1.5
P04436 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
P04436 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.65□□□□□ -1.5
P04436 AL445649.1-201ENST00000615941 691 ntBASIC5.65□□□□□ -1.5
P04436 AP003789.1-201ENST00000617737 605 ntBASIC5.65□□□□□ -1.5
P04436 MIR6861-201ENST00000618657 64 ntBASIC5.65□□□□□ -1.5
P04436 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.65□□□□□ -1.51
P04436 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.65□□□□□ -1.51
P04436 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.65□□□□□ -1.51
P04436 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
P04436 PABPC1P8-201ENST00000452851 2086 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms