Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.75□□□□□ -1.49
MT-ND1P03886 SLC25A51P2-201ENST00000535708 889 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.75□□□□□ -1.49
MT-ND1P03886 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.75□□□□□ -1.49
MT-ND1P03886 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.75□□□□□ -1.49
MT-ND1P03886 AC023080.1-201ENST00000551663 931 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.75□□□□□ -1.49
MT-ND1P03886 AC005332.4-201ENST00000592752 579 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 MIR6849-201ENST00000618543 69 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 AC241377.1-201ENST00000619797 406 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 AL137067.2-201ENST00000621202 131 ntBASIC5.75□□□□□ -1.49
MT-ND1P03886 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.75□□□□□ -1.49
MT-ND1P03886 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.75□□□□□ -1.49
MT-ND1P03886 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
MT-ND1P03886 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.75□□□□□ -1.49
MT-ND1P03886 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.75□□□□□ -1.49
MT-ND1P03886 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.75□□□□□ -1.49
MT-ND1P03886 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MT-ND1P03886 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC004656.1-201ENST00000568479 4951 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 AC011933.2-201ENST00000578539 2790 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC025470.1-201ENST00000510053 2032 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 MIR431-201ENST00000385266 114 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 RNA5SP155-201ENST00000411154 129 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 MEAF6P1-201ENST00000416092 327 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.74□□□□□ -1.49
MT-ND1P03886 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 ST13P12-201ENST00000508958 1094 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 TOMM22P4-201ENST00000511318 336 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.74□□□□□ -1.49
MT-ND1P03886 CYP4F27P-201ENST00000514557 494 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 TPM3P3-201ENST00000521343 354 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.74□□□□□ -1.49
MT-ND1P03886 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC244502.2-201ENST00000543361 851 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC068408.1-201ENST00000577406 1144 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC239868.2-201ENST00000564237 4527 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AC004076.2-201ENST00000620532 3323 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.74□□□□□ -1.49
MT-ND1P03886 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 FANCD2P2-201ENST00000437591 1400 ntBASIC5.74□□□□□ -1.49
MT-ND1P03886 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MT-ND1P03886 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.73□□□□□ -1.49
MT-ND1P03886 AL136984.1-201ENST00000607611 1893 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.73□□□□□ -1.49
MT-ND1P03886 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 AC123912.3-201ENST00000600907 1367 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
MT-ND1P03886 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MT-ND1P03886 SNORD1C-201ENST00000363315 78 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 RN7SKP17-201ENST00000411242 351 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 AC006509.1-201ENST00000420788 634 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.73□□□□□ -1.49
MT-ND1P03886 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MT-ND1P03886 NPM1P9-201ENST00000453156 844 ntBASIC5.73□□□□□ -1.49
MT-ND1P03886 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms