Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC027229.1-201ENST00000583887 253 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 AC018690.1-201ENST00000608144 626 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC126175.1-201ENST00000617041 758 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 AP005431.1-201ENST00000618479 319 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 MTCO1P11-201ENST00000429111 1528 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC112243.1-201ENST00000623949 3851 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 MAPK10-344ENST00000641718 3746 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.74□□□□□ -1.33
CHRNA1P02708 FO082842.1-201ENST00000423552 1370 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CHRNA1P02708 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 RNU1-150P-201ENST00000362491 162 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 SNORA11B-201ENST00000408175 129 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 AL096829.1-201ENST00000413677 457 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 RPL12P12-201ENST00000424633 501 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 BX323845.3-201ENST00000428215 527 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 BZW1P1-201ENST00000454901 1240 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 NPIPB1P-202ENST00000588786 828 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.74□□□□□ -1.33
CHRNA1P02708 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AL645933.2-201ENST00000606743 1207 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 AC109309.2-201ENST00000612597 332 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 AL357562.1-201ENST00000624911 609 ntBASIC6.74□□□□□ -1.33
CHRNA1P02708 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.74□□□□□ -1.33
CHRNA1P02708 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.74□□□□□ -1.33
CHRNA1P02708 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CHRNA1P02708 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHRNA1P02708 AC013488.1-201ENST00000526618 1838 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL161901.1-201ENST00000624954 3425 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL157831.2-201ENST00000564681 3095 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 BX284632.2-201ENST00000421091 399 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL035660.1-201ENST00000422041 222 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL512605.1-202ENST00000441919 381 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL359955.2-201ENST00000445380 353 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.73□□□□□ -1.33
CHRNA1P02708 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHRNA1P02708 SCARNA21.2-201ENST00000516600 166 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC007448.1-201ENST00000582714 234 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC009237.12-201ENST00000604755 742 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 AL445649.1-201ENST00000615941 691 ntBASIC6.73□□□□□ -1.33
CHRNA1P02708 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.73□□□□□ -1.33
CHRNA1P02708 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms