Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.51□□□□□ -1.37
APOEP02649 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.51□□□□□ -1.37
APOEP02649 AL138960.1-201ENST00000613838 513 ntBASIC6.51□□□□□ -1.37
APOEP02649 AL591926.1-201ENST00000620542 217 ntBASIC6.51□□□□□ -1.37
APOEP02649 AL683826.1-201ENST00000624104 627 ntBASIC6.51□□□□□ -1.37
APOEP02649 AP001052.1-201ENST00000626421 99 ntBASIC6.51□□□□□ -1.37
APOEP02649 AL357140.4-201ENST00000636827 412 ntBASIC6.51□□□□□ -1.37
APOEP02649 OR8A1-204ENST00000642111 1145 ntBASIC6.51□□□□□ -1.37
APOEP02649 AP004289.1-201ENST00000436307 2205 ntBASIC6.51□□□□□ -1.37
APOEP02649 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 GUCY1B2-204ENST00000531898 1979 ntBASIC6.51□□□□□ -1.37
APOEP02649 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
APOEP02649 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
APOEP02649 AC123769.1-201ENST00000530992 3192 ntBASIC6.51□□□□□ -1.37
APOEP02649 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 BIN2P1-201ENST00000504996 1530 ntBASIC6.5□□□□□ -1.37
APOEP02649 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.5□□□□□ -1.37
APOEP02649 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.5□□□□□ -1.37
APOEP02649 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
APOEP02649 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
APOEP02649 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 RN7SKP187-201ENST00000365536 330 ntBASIC6.5□□□□□ -1.37
APOEP02649 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AL360271.1-201ENST00000395679 510 ntBASIC6.5□□□□□ -1.37
APOEP02649 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.5□□□□□ -1.37
APOEP02649 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 HIGD1AP16-201ENST00000450986 258 ntBASIC6.5□□□□□ -1.37
APOEP02649 CR383656.1-201ENST00000484916 377 ntBASIC6.5□□□□□ -1.37
APOEP02649 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 RPL12P30-201ENST00000488389 499 ntBASIC6.5□□□□□ -1.37
APOEP02649 AC018797.1-201ENST00000510791 255 ntBASIC6.5□□□□□ -1.37
APOEP02649 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.5□□□□□ -1.37
APOEP02649 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.5□□□□□ -1.37
APOEP02649 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.5□□□□□ -1.37
APOEP02649 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.5□□□□□ -1.37
APOEP02649 DYNLL1P1-201ENST00000595442 269 ntBASIC6.5□□□□□ -1.37
APOEP02649 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.5□□□□□ -1.37
APOEP02649 AP003789.1-201ENST00000617737 605 ntBASIC6.5□□□□□ -1.37
APOEP02649 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
APOEP02649 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
APOEP02649 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.5□□□□□ -1.37
APOEP02649 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
APOEP02649 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
APOEP02649 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
APOEP02649 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
APOEP02649 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.49□□□□□ -1.37
APOEP02649 RNU1-65P-201ENST00000363919 148 ntBASIC6.49□□□□□ -1.37
APOEP02649 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
APOEP02649 MIR433-201ENST00000384837 93 ntBASIC6.49□□□□□ -1.37
APOEP02649 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.49□□□□□ -1.37
APOEP02649 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
APOEP02649 AL445238.1-204ENST00000400311 463 ntBASIC6.49□□□□□ -1.37
APOEP02649 RPS7P14-201ENST00000426405 583 ntBASIC6.49□□□□□ -1.37
APOEP02649 OR3D1P-201ENST00000438288 955 ntBASIC6.49□□□□□ -1.37
APOEP02649 PPIAP10-201ENST00000438675 458 ntBASIC6.49□□□□□ -1.37
APOEP02649 OR13K1P-201ENST00000444577 975 ntBASIC6.49□□□□□ -1.37
APOEP02649 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.49□□□□□ -1.37
APOEP02649 AL022237.1-201ENST00000446663 358 ntBASIC6.49□□□□□ -1.37
APOEP02649 REG1CP-206ENST00000447469 496 ntBASIC6.49□□□□□ -1.37
APOEP02649 HMGB1P7-201ENST00000450921 612 ntBASIC6.49□□□□□ -1.37
APOEP02649 AC104339.1-201ENST00000465478 348 ntBASIC6.49□□□□□ -1.37
APOEP02649 RN7SKP248-201ENST00000516278 305 ntBASIC6.49□□□□□ -1.37
APOEP02649 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.49□□□□□ -1.37
APOEP02649 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.49□□□□□ -1.37
APOEP02649 AC024405.1-201ENST00000532521 1042 ntBASIC6.49□□□□□ -1.37
APOEP02649 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.49□□□□□ -1.37
APOEP02649 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.49□□□□□ -1.37
APOEP02649 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
APOEP02649 AC002519.2-203ENST00000567043 837 ntBASIC6.49□□□□□ -1.37
APOEP02649 MIR4502-201ENST00000580432 81 ntBASIC6.49□□□□□ -1.37
APOEP02649 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.49□□□□□ -1.37
APOEP02649 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.49□□□□□ -1.37
APOEP02649 AC009237.12-201ENST00000604755 742 ntBASIC6.49□□□□□ -1.37
APOEP02649 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.49□□□□□ -1.37
APOEP02649 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.49□□□□□ -1.37
APOEP02649 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
APOEP02649 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms