Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 AC092111.1-201ENST00000618256 3358 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFBP01127 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 AL161901.1-201ENST00000624954 3425 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 CTAGE11P-201ENST00000451540 2353 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFBP01127 OR3D1P-201ENST00000438288 955 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFBP01127 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 SEPT14P12-201ENST00000442280 560 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFBP01127 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PDGFBP01127 RN7SL705P-201ENST00000481678 294 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFBP01127 AP000648.1-201ENST00000529682 397 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFBP01127 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 AC005244.1-201ENST00000582566 339 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AC010327.2-201ENST00000587647 488 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFBP01127 AL031601.1-201ENST00000605702 394 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 AC010998.3-201ENST00000613871 631 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFBP01127 AC183089.2-201ENST00000637931 916 ntBASIC6.34□□□□□ -1.39
PDGFBP01127 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFBP01127 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
PDGFBP01127 AC092821.3-202ENST00000641304 2767 ntBASIC6.34□□□□□ -1.4
PDGFBP01127 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.34□□□□□ -1.4
PDGFBP01127 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
PDGFBP01127 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PDGFBP01127 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFBP01127 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 CCNT2P1-201ENST00000423082 1315 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFBP01127 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 RN7SKP115-201ENST00000363177 317 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PDGFBP01127 AL445238.1-204ENST00000400311 463 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 RNA5SP156-201ENST00000410250 110 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFBP01127 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 KATNBL1P2-201ENST00000433311 835 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 GAPDHP75-201ENST00000433910 943 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 ELOCP3-201ENST00000439303 348 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 FTLP8-201ENST00000446770 267 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 AC073909.1-201ENST00000447112 999 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFBP01127 AC008953.1-201ENST00000497334 318 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFBP01127 AC090958.1-201ENST00000511122 351 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.33□□□□□ -1.4
PDGFBP01127 SETP21-201ENST00000514799 892 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 Y_RNA.710-201ENST00000516975 110 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 WBP1LP3-201ENST00000523033 208 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFBP01127 HIGD1AP5-201ENST00000529959 259 ntBASIC6.33□□□□□ -1.4
PDGFBP01127 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms