Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MBD4O95243 AC022325.1-201ENST00000502748 2199 ntBASIC7.4□□□□□ -1.23
MBD4O95243 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MBD4O95243 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
MBD4O95243 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.4□□□□□ -1.23
MBD4O95243 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.23
MBD4O95243 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.39□□□□□ -1.23
MBD4O95243 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.39□□□□□ -1.23
MBD4O95243 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.39□□□□□ -1.23
MBD4O95243 AC119674.1-213ENST00000641177 1386 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC233968.1-201ENST00000611212 1300 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
MBD4O95243 RNU1-134P-201ENST00000362935 165 ntBASIC7.39□□□□□ -1.23
MBD4O95243 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.39□□□□□ -1.23
MBD4O95243 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.39□□□□□ -1.23
MBD4O95243 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC002069.1-201ENST00000429649 1159 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.39□□□□□ -1.23
MBD4O95243 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MBD4O95243 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC103563.5-201ENST00000455643 364 ntBASIC7.39□□□□□ -1.23
MBD4O95243 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.39□□□□□ -1.23
MBD4O95243 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AC092332.1-201ENST00000563684 829 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC090826.1-203ENST00000569235 490 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.39□□□□□ -1.23
MBD4O95243 AL513218.1-201ENST00000606527 391 ntBASIC7.39□□□□□ -1.23
MBD4O95243 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.39□□□□□ -1.23
MBD4O95243 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.39□□□□□ -1.23
MBD4O95243 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.39□□□□□ -1.23
MBD4O95243 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.39□□□□□ -1.23
MBD4O95243 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
MBD4O95243 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MBD4O95243 DOCK11P1-201ENST00000553480 5932 ntBASIC7.39□□□□□ -1.23
MBD4O95243 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.38□□□□□ -1.23
MBD4O95243 CCAT2-201ENST00000630920 1752 ntBASIC7.38□□□□□ -1.23
MBD4O95243 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.38□□□□□ -1.23
MBD4O95243 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 AC008627.1-201ENST00000517511 1704 ntBASIC7.38□□□□□ -1.23
MBD4O95243 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.38□□□□□ -1.23
MBD4O95243 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.38□□□□□ -1.23
MBD4O95243 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MBD4O95243 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.38□□□□□ -1.23
MBD4O95243 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
MBD4O95243 RN7SKP275-201ENST00000364626 301 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AL050305.1-201ENST00000399993 1230 ntBASIC7.38□□□□□ -1.23
MBD4O95243 RN7SKP161-201ENST00000411110 305 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.38□□□□□ -1.23
MBD4O95243 VN1R3-201ENST00000418822 919 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 RPL6P30-201ENST00000443382 862 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 HMGN1P2-201ENST00000445197 310 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 AP002371.1-201ENST00000463604 433 ntBASIC7.38□□□□□ -1.23
MBD4O95243 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 RN7SKP238-201ENST00000516483 249 ntBASIC7.38□□□□□ -1.23
MBD4O95243 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 AC107993.1-201ENST00000591343 684 ntBASIC7.38□□□□□ -1.23
MBD4O95243 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.38□□□□□ -1.23
MBD4O95243 AL021368.3-201ENST00000607119 578 ntBASIC7.38□□□□□ -1.23
MBD4O95243 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.38□□□□□ -1.23
MBD4O95243 AL359742.1-201ENST00000622497 540 ntBASIC7.38□□□□□ -1.23
MBD4O95243 MIR1910-201ENST00000636955 80 ntBASIC7.38□□□□□ -1.23
MBD4O95243 AL596275.2-208ENST00000641192 594 ntBASIC7.38□□□□□ -1.23
MBD4O95243 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.38□□□□□ -1.23
MBD4O95243 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MBD4O95243 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.37□□□□□ -1.23
MBD4O95243 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
MBD4O95243 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.37□□□□□ -1.23
MBD4O95243 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MBD4O95243 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
MBD4O95243 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MBD4O95243 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
MBD4O95243 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MBD4O95243 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.37□□□□□ -1.23
MBD4O95243 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MBD4O95243 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms