Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV5S1A1TA0A578 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.46□□□□□ -1.38
TCRBV5S1A1TA0A578 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV5S1A1TA0A578 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 SNORA70.9-201ENST00000384370 135 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 RNU6-883P-201ENST00000384597 107 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 PSMA6P1-201ENST00000400275 741 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 TRGV7-201ENST00000427089 353 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 ZFAND6P1-201ENST00000434138 605 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 OR7E22P-201ENST00000478335 1035 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC106806.2-201ENST00000509365 500 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC090958.1-201ENST00000511122 351 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 HMGN1P17-201ENST00000513734 295 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 MRPS5P3-201ENST00000515577 166 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AP001804.1-201ENST00000526868 919 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 HNRNPRP2-201ENST00000528421 743 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC244502.2-201ENST00000543361 851 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC005479.3-201ENST00000602790 431 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 SMIM12P1-201ENST00000603004 274 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC015802.5-201ENST00000607478 399 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 AC034229.4-201ENST00000607861 441 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 NBPF8-201ENST00000583271 5330 ntBASIC6.45□□□□□ -1.38
TCRBV5S1A1TA0A578 MTCO1P22-201ENST00000604619 1360 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC022325.1-201ENST00000502748 2199 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL662795.2-201ENST00000624252 3706 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 RNU1-59P-201ENST00000364829 162 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 MIR188-201ENST00000385034 86 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 GTF3AP1-201ENST00000416942 1004 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC099782.1-201ENST00000425889 474 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL590762.3-201ENST00000436372 640 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 RPL23AP60-201ENST00000450011 454 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 MTND6P32-201ENST00000457611 483 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 RN7SL552P-201ENST00000462094 276 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 SNX18P25-201ENST00000510539 758 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 OR1E3-201ENST00000575608 948 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 MIR744-201ENST00000578242 98 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AC092944.2-201ENST00000605443 889 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 U1.25-201ENST00000614085 162 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 U1.34-201ENST00000618578 162 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 U1.31-201ENST00000620022 160 ntBASIC6.44□□□□□ -1.38
TCRBV5S1A1TA0A578 ZNF101P1-201ENST00000435701 1720 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms