Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PACSIN3Q9UKS6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 RNU1-46P-201ENST00000384425 164 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MIR187-201ENST00000385062 109 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 SNRPEP5-201ENST00000425442 278 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 VN1R108P-201ENST00000431580 830 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC009518.3-201ENST00000438972 253 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 RPL23AP28-201ENST00000448062 470 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC093166.2-201ENST00000455969 1017 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 GAPDHP53-201ENST00000458397 924 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC079193.1-201ENST00000460497 588 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 RN7SL165P-201ENST00000477476 291 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 DCAF13P2-201ENST00000514188 555 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC100854.1-201ENST00000520351 341 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MRPS36P5-201ENST00000551909 298 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC089984.3-201ENST00000552838 363 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 ZNF971P-201ENST00000562068 1249 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 NIFKP6-201ENST00000598115 845 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 U91328.4-201ENST00000608919 517 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AC079395.3-201ENST00000615161 484 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AL355493.4-201ENST00000618530 292 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AP002967.1-201ENST00000624203 539 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 LINC01616-201ENST00000561816 2280 ntBASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PACSIN3Q9UKS6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 OR2A3P-202ENST00000641249 1776 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 NEK2P2-201ENST00000438441 1338 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 HSPD1P1-201ENST00000503199 1726 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 MTCO2P31-201ENST00000402702 684 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 TMA16P2-201ENST00000413187 601 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AC114402.2-201ENST00000432760 643 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 CHCHD4P5-201ENST00000436684 427 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 MTCYBP31-201ENST00000438855 1122 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 BX005266.3-201ENST00000443013 1075 ntBASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.31□□□□□ -1.4
PACSIN3Q9UKS6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms