Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RNA5SP273-201ENST00000362484 113 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RNA5SP477-201ENST00000362639 119 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RN7SKP78-201ENST00000364711 318 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL354890.1-201ENST00000413730 346 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC245884.2-201ENST00000426257 404 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 BMS1P10-201ENST00000443754 1120 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL355032.1-201ENST00000472981 438 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RN7SL193P-201ENST00000491708 276 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC060775.1-201ENST00000518241 520 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 IGLVIV-64-201ENST00000518581 301 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 OR56A7P-201ENST00000524865 941 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 TRIM77BP-201ENST00000524985 1119 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC005244.1-201ENST00000582566 339 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 MIR6793-201ENST00000612376 63 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AC245014.3-201ENST00000618589 347 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 RNA5SP500-201ENST00000364486 119 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AL445928.1-201ENST00000435545 222 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 RPS7P3-201ENST00000443360 580 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AC011411.1-201ENST00000509592 876 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 DPPA3P2-201ENST00000553589 478 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AP000894.4-201ENST00000610185 483 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AL136097.3-201ENST00000611097 505 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AL121768.1-201ENST00000613917 2544 ntBASIC8.17□□□□□ -1.1
NPC1L1Q9UHC9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 RNA5SP375-201ENST00000362975 119 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC016739.1-201ENST00000405359 345 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AP000648.1-201ENST00000529682 397 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC090826.1-203ENST00000569235 490 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AL031601.1-201ENST00000605702 394 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC092681.3-201ENST00000609463 678 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC096708.4-201ENST00000620563 552 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 CCDC162P-202ENST00000368966 6751 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AL355377.1-201ENST00000621125 1653 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 EPS15P1-202ENST00000459691 2071 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC009831.5-201ENST00000624000 3189 ntBASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPC1L1Q9UHC9 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms