Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 LINC01616-201ENST00000561816 2280 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AP000547.3-204ENST00000588548 2523 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 SUGT1P2-201ENST00000379452 992 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC017035.1-201ENST00000411999 1115 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AL359885.1-201ENST00000415786 903 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AL139415.1-201ENST00000424862 352 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 RPSAP65-201ENST00000429660 595 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 GAPDHP75-201ENST00000433910 943 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 SNX18P26-201ENST00000458433 740 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC027369.2-201ENST00000528030 440 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 TPRX1P1-201ENST00000557620 319 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 RN7SL753P-201ENST00000581238 290 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC022400.9-201ENST00000623633 273 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AC129915.3-201ENST00000634128 948 ntBASIC5.88□□□□□ -1.47
CCDC88CQ9P219 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC88CQ9P219 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AL157702.1-201ENST00000398764 426 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AL022237.1-201ENST00000446663 358 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 RN7SL284P-201ENST00000498823 275 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 RN7SKP238-201ENST00000516483 249 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC092332.1-201ENST00000563684 829 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 MIR7159-201ENST00000620587 66 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 OR7E91P-202ENST00000642062 1198 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 FBXL21-201ENST00000297158 1305 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AOX3P-204ENST00000491025 2107 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 KARSP1-201ENST00000451871 1752 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC022325.1-201ENST00000502748 2199 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC008627.1-201ENST00000517511 1704 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AL354890.1-201ENST00000413730 346 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 PPIAP10-201ENST00000438675 458 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 HLA-DPA3-207ENST00000454398 229 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC023194.2-201ENST00000465398 406 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 Y_RNA.710-201ENST00000516975 110 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 IGKV2-4-201ENST00000523070 340 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 MRPS21P8-201ENST00000569196 235 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 NPIPB1P-202ENST00000588786 828 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 AL008723.3-201ENST00000608926 449 ntBASIC5.87□□□□□ -1.47
CCDC88CQ9P219 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC88CQ9P219 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms