Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL451061.1-201ENST00000407887 862 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL662791.3-201ENST00000413771 776 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 MTND4LP17-201ENST00000414607 293 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC231533.2-201ENST00000419045 978 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 MTCYBP7-201ENST00000419540 1134 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 MTCYBP29-201ENST00000436327 1006 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 SDHCP3-201ENST00000445371 506 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL157827.1-201ENST00000447622 132 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 TPT1P1-201ENST00000458495 518 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 SNORA81.1-201ENST00000458922 177 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 RN7SL836P-201ENST00000476140 296 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 RPS4XP17-201ENST00000479057 754 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 LARP7P4-201ENST00000481075 878 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 EIF1P7-201ENST00000487533 337 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 OR8G5-201ENST00000524943 1041 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AP000916.1-201ENST00000533869 835 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 EEF1B2P1-201ENST00000567221 672 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 BNIP3P32-201ENST00000600015 554 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AL359704.2-201ENST00000604335 521 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC099785.1-201ENST00000605697 437 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC025171.4-201ENST00000607250 1047 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC091768.1-201ENST00000609258 930 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC245100.7-201ENST00000609678 442 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC006335.3-201ENST00000613408 292 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AP000484.1-201ENST00000620067 1252 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC078880.4-201ENST00000617627 1749 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 AC093844.1-201ENST00000514910 1361 ntBASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCM2LQ9NUG4 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 OR2A3P-202ENST00000641249 1776 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 SNORA73B-201ENST00000363217 204 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 MIR551B-201ENST00000384984 96 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 UBE2V1P11-201ENST00000411559 285 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC008173.1-201ENST00000418901 264 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AL390840.1-201ENST00000420303 988 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AL034379.1-201ENST00000423216 253 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC092865.3-201ENST00000425390 1026 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 ARF4P4-201ENST00000439608 520 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 MED6P1-201ENST00000439659 713 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 MTND1P33-201ENST00000446251 917 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 RPSAP7-201ENST00000456871 885 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC115223.1-201ENST00000466377 870 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 RN7SL561P-201ENST00000488553 281 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 RPL10P7-201ENST00000495649 625 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 H3F3AP3-201ENST00000497682 407 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 PSMA2P2-201ENST00000504319 686 ntBASIC6.54□□□□□ -1.36
CCM2LQ9NUG4 AC105420.1-201ENST00000504389 582 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms