Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RN7SL197P-201ENST00000466981 299 ntBASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 MIR4312-201ENST00000579909 76 ntBASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC127071.2-201ENST00000623293 527 ntBASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC117503.3-201ENST00000623811 601 ntBASIC5.56□□□□□ -1.52
HMG20AQ9NP66 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.56□□□□□ -1.52
HMG20AQ9NP66 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL034546.1-201ENST00000623740 3693 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PSMC1P4-201ENST00000515236 1327 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC023632.6-201ENST00000624338 2177 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RNA5SP355-201ENST00000365317 135 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL590635.1-201ENST00000406314 586 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL358178.1-201ENST00000407698 397 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 NFU1P1-201ENST00000413128 774 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL359092.1-201ENST00000417156 265 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RPL3P11-201ENST00000434028 1146 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL845321.1-201ENST00000444603 348 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC023271.1-201ENST00000445936 1090 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RBMY2EP-202ENST00000456360 940 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RPL12P24-201ENST00000474907 486 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC134698.1-201ENST00000511619 643 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC096661.1-201ENST00000515870 822 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL359219.2-201ENST00000555184 348 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RPL12P48-201ENST00000605620 304 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC023206.1-201ENST00000605824 298 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC093635.1-201ENST00000609028 555 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AL442128.2-201ENST00000620246 1824 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.55□□□□□ -1.52
HMG20AQ9NP66 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMG20AQ9NP66 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMG20AQ9NP66 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms