Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BX679664.2-201ENST00000439282 283 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 RARRES2P3-201ENST00000457739 473 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC044810.1-201ENST00000480271 711 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC093816.1-201ENST00000515076 913 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC116917.1-201ENST00000520558 305 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AP001000.1-201ENST00000526843 742 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC004890.3-201ENST00000605566 1095 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 SNORA74.4-201ENST00000607595 199 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC138627.1-204ENST00000641894 765 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AL359976.1-201ENST00000418655 3528 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AC007342.9-201ENST00000623877 1385 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 LINC01613-201ENST00000561476 2780 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC007159.1-201ENST00000566529 4706 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 RPL11P4-201ENST00000332269 436 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 GNG5P2-201ENST00000372054 207 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 PSMA6P1-201ENST00000400275 741 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 OSTCP4-201ENST00000424397 449 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 RN7SL836P-201ENST00000476140 296 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 RN7SL369P-201ENST00000477138 299 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 SNORA74.1-201ENST00000516320 180 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC008676.3-201ENST00000521237 435 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 MT1CP-201ENST00000567054 174 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC020916.2-201ENST00000591242 360 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 WBP1LP12-201ENST00000604449 331 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 AC012676.3-201ENST00000614983 479 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 MIR6811-201ENST00000620409 58 ntBASIC6.4□□□□□ -1.38
PCDH9Q9HC56 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDH9Q9HC56 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 AL731532.1-201ENST00000623972 4236 ntBASIC6.4□□□□□ -1.39
PCDH9Q9HC56 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 AL161901.1-201ENST00000624954 3425 ntBASIC6.4□□□□□ -1.39
PCDH9Q9HC56 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.4□□□□□ -1.39
PCDH9Q9HC56 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 CASC19-246ENST00000641625 1606 ntBASIC6.39□□□□□ -1.39
PCDH9Q9HC56 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 AL359091.1-201ENST00000449048 1734 ntBASIC6.39□□□□□ -1.39
PCDH9Q9HC56 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 AP003486.1-201ENST00000525716 3994 ntBASIC6.39□□□□□ -1.39
PCDH9Q9HC56 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH9Q9HC56 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms