Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC012676.3-201ENST00000614983 479 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC116667.2-201ENST00000641075 823 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC092692.1-201ENST00000623625 2595 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL136984.1-201ENST00000607611 1893 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 RPL11P4-201ENST00000332269 436 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 OSTCP4-201ENST00000424397 449 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 POU5F1P5-201ENST00000445059 658 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC007383.1-201ENST00000445875 636 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL445687.2-201ENST00000458156 728 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 RPL9P15-201ENST00000491096 532 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC010343.2-201ENST00000510162 224 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC116917.1-201ENST00000520558 305 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC009729.1-201ENST00000548873 1133 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC138207.8-204ENST00000579588 527 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 RN7SL475P-201ENST00000583379 298 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC011500.1-201ENST00000601963 469 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 WBP1LP12-201ENST00000604449 331 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC006924.1-201ENST00000610750 559 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AL031658.2-201ENST00000616850 651 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 MIR7159-201ENST00000620587 66 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 AC010325.3-201ENST00000641084 394 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 OR7E91P-202ENST00000642062 1198 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 CASC19-246ENST00000641625 1606 ntBASIC5.85□□□□□ -1.47
COL21A1Q96P44 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL21A1Q96P44 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC096921.2-201ENST00000561507 1916 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AP001541.1-201ENST00000623322 1904 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 RN7SKP250-201ENST00000363924 321 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 RNU11-201ENST00000387069 134 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AL445238.1-204ENST00000400311 463 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 DHFRP2-201ENST00000414224 547 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC097359.1-201ENST00000447946 463 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms