Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 SNORA35B-201ENST00000607417 129 ntBASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 AC005899.6-201ENST00000620729 297 ntBASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 AC009120.7-201ENST00000623452 780 ntBASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM5Q96HC4 TTC41P-205ENST00000551270 3963 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LINC01613-201ENST00000561476 2780 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL139805.1-201ENST00000407837 289 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC015977.1-201ENST00000418887 292 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 OSTCP4-201ENST00000424397 449 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC073072.2-201ENST00000447425 348 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 RPL23AP60-201ENST00000450011 454 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 RBMY2HP-201ENST00000457961 720 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SLC25A51P1-201ENST00000468432 871 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL133372.1-201ENST00000493565 745 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC117500.1-201ENST00000497352 755 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC008945.1-201ENST00000505144 499 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 RN7SKP67-201ENST00000515905 235 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC113191.1-201ENST00000517759 403 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL137067.2-201ENST00000621202 131 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 OR7A1P-202ENST00000641542 1158 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 AL022323.4-201ENST00000623980 13120 ntBASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM5Q96HC4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PDLIM5Q96HC4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC092111.2-201ENST00000611627 1414 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AL133243.2-201ENST00000610331 1621 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RNA5SP346-201ENST00000363541 121 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RNU1-59P-201ENST00000364829 162 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RPL23AP17-201ENST00000401064 499 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 PRELID1P1-201ENST00000403549 660 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RNA5SP198-201ENST00000410376 127 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LDHAP2-201ENST00000437325 985 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RPS18P1-201ENST00000447840 458 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC073594.1-201ENST00000462065 364 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms