Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 RNA5SP87-201ENST00000384155 118 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 RNA5SP156-201ENST00000410250 110 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 MRPL53P1-201ENST00000414323 319 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL807761.1-201ENST00000417622 171 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC091390.1-201ENST00000433904 331 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 PABPC1P8-201ENST00000452851 2086 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC092905.1-201ENST00000467527 949 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 OR11J2P-201ENST00000555298 907 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 MRRFP1-201ENST00000435941 1675 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 RNA5SP30-201ENST00000365552 115 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 DUTP4-201ENST00000424782 475 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL360081.1-201ENST00000428299 555 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AP000547.1-201ENST00000454360 617 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 TAS2R6P-201ENST00000605022 826 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 EDA-213ENST00000616899 4643 ntTSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 MIR199B-201ENST00000384849 110 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 BX119917.1-201ENST00000432517 502 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AL671862.1-201ENST00000515851 349 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 HSPE1P2-201ENST00000554777 306 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PRUNEP1-201ENST00000425846 705 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 HNRNPCP1-201ENST00000556181 766 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC093890.1-201ENST00000502554 540 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC110056.1-201ENST00000525759 911 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AP000662.1-201ENST00000530952 487 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC141002.1-201ENST00000607025 279 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 AC087385.3-201ENST00000620477 187 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 OR11H2-202ENST00000641517 1085 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 GUCY1B2-204ENST00000531898 1979 ntBASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms