Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR191-201ENST00000384873 92 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 OOSP1-201ENST00000398992 1270 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SNORA11.5-201ENST00000408163 128 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC000089.1-201ENST00000424559 801 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC064862.5-201ENST00000440618 334 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AL445991.1-201ENST00000450381 475 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 CCNJP1-201ENST00000450600 1149 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 RAB28P2-201ENST00000454299 641 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC044810.1-201ENST00000480271 711 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 RN7SL655P-201ENST00000486087 298 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC244502.2-201ENST00000543361 851 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC009729.1-201ENST00000548873 1133 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC020916.2-201ENST00000591242 360 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC005858.3-201ENST00000624756 589 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC069542.2-201ENST00000624816 216 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC004076.2-201ENST00000620532 3323 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AL353743.3-201ENST00000442109 1468 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RPL31P11-201ENST00000426558 1558 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC022325.1-201ENST00000502748 2199 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 BCORP1-203ENST00000513194 5093 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RNA5SP152-201ENST00000365184 110 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AL079341.1-201ENST00000404701 1207 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RN7SKP281-201ENST00000410472 352 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RANP6-201ENST00000413691 644 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC016908.1-201ENST00000442571 1219 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RPL5P33-201ENST00000487833 905 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 TRBV5-2-201ENST00000489095 273 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 BTG1P1-201ENST00000540396 508 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 AC007603.3-201ENST00000636915 979 ntBASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC112Q8NEF3 ADAM24P-201ENST00000398655 2101 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 SNORD94-201ENST00000386037 137 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 U3.23-201ENST00000391132 200 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 FDPSP5-201ENST00000399474 1057 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 BX276092.6-201ENST00000430476 250 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms