Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU6-943P-201ENST00000516960 98 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC007537.1-201ENST00000539347 327 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 NXPE2P1-201ENST00000543705 726 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC091932.1-201ENST00000569381 427 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 RN7SL131P-201ENST00000579043 256 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AP000919.1-202ENST00000581139 1264 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 MIR5682-201ENST00000584864 76 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 MIR4428-201ENST00000584884 73 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC084373.1-201ENST00000603311 235 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AL078624.2-201ENST00000605063 554 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 HMGB1P51-201ENST00000605166 638 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC021851.1-201ENST00000608537 1082 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AL096803.3-201ENST00000609032 532 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 MIR8082-201ENST00000612488 81 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 AC102941.1-201ENST00000567616 1537 ntBASIC6.04□□□□□ -1.44
CPEB3Q8NE35 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.04□□□□□ -1.44
CPEB3Q8NE35 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 ATP5BP1-201ENST00000411980 1574 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AP003486.1-201ENST00000525716 3994 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SNORD116-8-201ENST00000384365 95 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RNA5SP35-201ENST00000391257 129 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 HMGB3P19-201ENST00000403971 560 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RPL22P18-201ENST00000417197 377 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 MTCO3P4-201ENST00000419236 787 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 FO393414.1-201ENST00000428697 1184 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 MTCO1P45-201ENST00000431457 267 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC009518.3-201ENST00000438972 253 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AL592114.2-201ENST00000440142 532 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC044797.1-201ENST00000445744 679 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 ST13P21-201ENST00000453250 1098 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RN7SL834P-201ENST00000461450 286 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RPL21P18-201ENST00000469899 480 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC026826.1-201ENST00000493002 361 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC112184.1-201ENST00000505179 312 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC010486.3-201ENST00000511602 785 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RN7SKP98-201ENST00000517070 156 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 OR5D2P-201ENST00000524390 911 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 OR4A17P-201ENST00000526032 904 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 CASP1P2-201ENST00000526830 1258 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC016144.1-201ENST00000548175 1087 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC092868.3-201ENST00000560515 784 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC009097.3-201ENST00000563557 1018 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AP005136.2-201ENST00000583253 1049 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC018690.1-201ENST00000608144 626 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC026951.2-201ENST00000613847 241 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AC091304.6-201ENST00000619761 202 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 AP001153.1-201ENST00000641024 338 ntBASIC6.03□□□□□ -1.44
CPEB3Q8NE35 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPEB3Q8NE35 OR2A3P-202ENST00000641249 1776 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms