Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC027575.3-201ENST00000583058 2747 ntBASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.14□□□□□ -1.59
ZNF439Q8NDP4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC096921.2-201ENST00000561507 1916 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC005261.2-201ENST00000593427 4258 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AL360271.1-201ENST00000395679 510 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC003045.1-201ENST00000398779 713 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AL360013.1-201ENST00000419031 858 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC007562.1-201ENST00000421819 517 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 REREP1Y-201ENST00000422655 198 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ARMC4P1-201ENST00000438905 707 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 REREP2Y-201ENST00000439103 200 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 SOCS5P1-201ENST00000440415 949 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 PA2G4P1-201ENST00000442248 1197 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC079922.1-201ENST00000443291 359 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 OR2L9P-201ENST00000444456 913 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC023274.2-201ENST00000445264 521 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 RANP2-201ENST00000456833 229 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 RN7SL39P-201ENST00000462264 297 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 RN7SL326P-201ENST00000477493 296 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 MIR212-201ENST00000586026 110 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 NPIPB1P-202ENST00000588786 828 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 DYNLL1P1-201ENST00000595442 269 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 MIR6774-201ENST00000614651 70 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC003992.1-201ENST00000635364 557 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AP001541.1-201ENST00000623322 1904 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 AC083837.1-201ENST00000565297 2994 ntBASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF439Q8NDP4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 RN7SKP121-201ENST00000410842 305 ntBASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AC021876.1-201ENST00000425959 359 ntBASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AC112492.2-201ENST00000432774 1030 ntBASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 GAPDHP75-201ENST00000433910 943 ntBASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 RPEP4-201ENST00000437636 602 ntBASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF439Q8NDP4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms