Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL121768.1-201ENST00000613917 2544 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CCDC50Q8IVM0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AL033519.1-201ENST00000407266 307 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC092651.1-201ENST00000426110 312 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 GTF3AP6-201ENST00000432585 986 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC234771.4-201ENST00000441416 730 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC016908.1-201ENST00000442571 1219 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 PPIAP32-201ENST00000449940 472 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 RPL31P11-202ENST00000454082 372 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC112187.1-201ENST00000455837 479 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC073594.1-201ENST00000462065 364 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC136777.2-201ENST00000522979 358 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 RPA2P3-201ENST00000533268 770 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC092865.1-201ENST00000544395 1023 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC037479.1-201ENST00000558361 625 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC027796.1-201ENST00000575593 512 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 MIR4732-201ENST00000581873 76 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 MIR6070-201ENST00000613967 103 ntBASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC50Q8IVM0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 PEX12P1-201ENST00000400284 1048 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 BX119904.3-201ENST00000428194 957 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 RN7SL83P-201ENST00000468131 297 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC026782.2-201ENST00000510845 636 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 RNU2-45P-201ENST00000516068 187 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 IGHV4-55-201ENST00000520889 368 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC084851.2-201ENST00000530377 364 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 NPIPB1P-202ENST00000588786 828 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 AC002069.2-201ENST00000603580 883 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 MIR6883-201ENST00000614952 78 ntBASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms