Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AL121936.2-201ENST00000641935 662 ntBASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP54Q7Z3B4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 RNA5SP485-201ENST00000365053 119 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 RNU1-84P-201ENST00000365447 164 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 MIR137-201ENST00000385223 102 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AL360013.1-201ENST00000419031 858 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 BX119904.3-201ENST00000428194 957 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC099670.1-201ENST00000455141 783 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 RPS7P10-201ENST00000464254 603 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC022206.1-201ENST00000495947 347 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 RN7SKP34-201ENST00000516142 244 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 IGHV1-14-201ENST00000523391 241 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC124891.1-201ENST00000536322 519 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AL121839.1-201ENST00000556233 1185 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC025283.1-201ENST00000572039 734 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 WBP1LP11-201ENST00000586141 328 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AL158062.1-201ENST00000619632 745 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 TNPO1P2-201ENST00000426249 2665 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 AC112243.1-201ENST00000623949 3851 ntBASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP54Q7Z3B4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.96□□□□□ -1.45
NUP54Q7Z3B4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RN7SKP186-201ENST00000365371 303 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RNU6-729P-201ENST00000384399 107 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RN7SKP38-201ENST00000410782 309 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms