Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AL139099.4-201ENST00000614802 114 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 CASC19-222ENST00000641321 1173 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 MRE11P1-201ENST00000464884 2127 ntBASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 AL391261.1-201ENST00000555712 1479 ntBASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 TNPO1P1-201ENST00000423641 1138 ntBASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 AC068522.1-201ENST00000482895 345 ntBASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42BPAQ5VT25 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 RNA5SP30-201ENST00000365552 115 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 RANP1-206ENST00000455094 651 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 NRBF2P4-201ENST00000520874 850 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC027334.1-201ENST00000603257 310 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 LINC01616-201ENST00000561816 2280 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 C4BPAP1-201ENST00000415474 1893 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AL022319.1-201ENST00000458183 1167 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 BX510359.5-201ENST00000515651 304 ntBASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42BPAQ5VT25 AC114786.1-201ENST00000512892 1415 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 AL357752.1-201ENST00000412817 349 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 RPL35AP19-201ENST00000469425 329 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 AC024558.1-201ENST00000505008 528 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 OR4A42P-201ENST00000531397 938 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 AC005840.5-201ENST00000619166 599 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 AC007683.2-201ENST00000624681 714 ntBASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42BPAQ5VT25 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 AC053481.2-202ENST00000582394 1500 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 AC112243.1-201ENST00000623949 3851 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 AL159987.1-201ENST00000347911 293 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 SPTLC1P2-201ENST00000407089 121 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 MYL6P5-201ENST00000412707 459 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.92□□□□□ -0.98
CDC42BPAQ5VT25 CNOT7P2-201ENST00000441051 832 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms