Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC024651.2-201ENST00000562480 2098 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 RNA5SP375-201ENST00000362975 119 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 RNA5SP478-201ENST00000364657 115 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SNORA17A-201ENST00000391185 133 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 MIR1203-201ENST00000408812 85 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 RN7SKP229-201ENST00000410465 302 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 RPL35AP3-201ENST00000414680 288 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 UBE2V1P14-201ENST00000415815 558 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 CFL1P4-201ENST00000451536 498 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC011476.1-201ENST00000466725 307 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC093524.1-201ENST00000564266 1094 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 NPIPB1P-202ENST00000588786 828 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC009237.12-201ENST00000604755 742 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AP000894.4-201ENST00000610185 483 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AL512624.1-201ENST00000613638 469 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC245014.3-201ENST00000618589 347 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC129778.1-202ENST00000623812 261 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SNORA17.5-201ENST00000630429 132 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AL591379.1-207ENST00000635982 261 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 AC139426.3-201ENST00000605648 2059 ntBASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHROOM1Q2M3G4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 BRD7P6-201ENST00000431406 1860 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 RNA5SP242-201ENST00000364171 118 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 RNU1-24P-201ENST00000364285 165 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SNORA11B-201ENST00000408175 129 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 CYP4F30P-202ENST00000420048 405 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SUMO2P3-201ENST00000438311 288 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 RPL36AP39-201ENST00000445859 318 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 RPS27AP3-201ENST00000453803 454 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 RN7SL273P-201ENST00000481561 299 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AC106872.4-201ENST00000510050 523 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 SNORA81.2-201ENST00000516868 170 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 MIR5095-201ENST00000578844 88 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 PRELID3BP3-201ENST00000584963 545 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AL450226.2-201ENST00000622913 439 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AC012254.5-201ENST00000623573 478 ntBASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms