Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 RPA2P3-201ENST00000533268 770 ntBASIC6.26□□□□□ -1.41
CBX1P83916 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CBX1P83916 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 AL445383.1-201ENST00000554689 874 ntBASIC6.26□□□□□ -1.41
CBX1P83916 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.26□□□□□ -1.41
CBX1P83916 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CBX1P83916 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CBX1P83916 AL139123.1-201ENST00000612008 430 ntBASIC6.26□□□□□ -1.41
CBX1P83916 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CBX1P83916 AL161420.1-201ENST00000619393 264 ntBASIC6.26□□□□□ -1.41
CBX1P83916 AC073488.9-201ENST00000631601 754 ntBASIC6.26□□□□□ -1.41
CBX1P83916 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.26□□□□□ -1.41
CBX1P83916 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CBX1P83916 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.26□□□□□ -1.41
CBX1P83916 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 TYMSP1-201ENST00000407851 869 ntBASIC6.25□□□□□ -1.41
CBX1P83916 RNA5SP280-201ENST00000411230 115 ntBASIC6.25□□□□□ -1.41
CBX1P83916 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CBX1P83916 AP003385.1-201ENST00000426387 893 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AL596268.1-201ENST00000427910 1048 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 AC108479.1-201ENST00000431142 427 ntBASIC6.25□□□□□ -1.41
CBX1P83916 MYL6P3-201ENST00000436904 432 ntBASIC6.25□□□□□ -1.41
CBX1P83916 ARMC8P1-201ENST00000443069 1289 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 ENPP7P11-201ENST00000505915 627 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AC106774.2-201ENST00000510266 406 ntBASIC6.25□□□□□ -1.41
CBX1P83916 OR52H2P-201ENST00000514607 902 ntBASIC6.25□□□□□ -1.41
CBX1P83916 IGLV3-24-201ENST00000517477 197 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AC100854.1-201ENST00000520351 341 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 UBE2CP4-201ENST00000561405 535 ntBASIC6.25□□□□□ -1.41
CBX1P83916 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 AP005262.1-201ENST00000582646 997 ntBASIC6.25□□□□□ -1.41
CBX1P83916 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.25□□□□□ -1.41
CBX1P83916 AC011447.2-201ENST00000592921 283 ntBASIC6.25□□□□□ -1.41
CBX1P83916 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 AC018690.1-201ENST00000608144 626 ntBASIC6.25□□□□□ -1.41
CBX1P83916 FAM27E3-202ENST00000614611 340 ntBASIC6.25□□□□□ -1.41
CBX1P83916 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 C18orf12-201ENST00000623329 537 ntBASIC6.25□□□□□ -1.41
CBX1P83916 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.25□□□□□ -1.41
CBX1P83916 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CBX1P83916 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CBX1P83916 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CBX1P83916 GOT2P1-201ENST00000440922 1309 ntBASIC6.25□□□□□ -1.41
CBX1P83916 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
CBX1P83916 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 RN7SKP55-201ENST00000364888 307 ntBASIC6.24□□□□□ -1.41
CBX1P83916 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 SNORA51.7-201ENST00000384171 134 ntBASIC6.24□□□□□ -1.41
CBX1P83916 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CBX1P83916 RPL5P20-201ENST00000403848 896 ntBASIC6.24□□□□□ -1.41
CBX1P83916 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.24□□□□□ -1.41
CBX1P83916 HSPE1P16-201ENST00000426640 348 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.24□□□□□ -1.41
CBX1P83916 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.24□□□□□ -1.41
CBX1P83916 AL359265.1-201ENST00000440296 795 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.24□□□□□ -1.41
CBX1P83916 AC012512.1-201ENST00000446594 718 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC079594.1-201ENST00000489757 331 ntBASIC6.24□□□□□ -1.41
CBX1P83916 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.24□□□□□ -1.41
CBX1P83916 AL135933.1-201ENST00000498657 802 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.24□□□□□ -1.41
CBX1P83916 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.24□□□□□ -1.41
CBX1P83916 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.24□□□□□ -1.41
CBX1P83916 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.24□□□□□ -1.41
CBX1P83916 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.24□□□□□ -1.41
CBX1P83916 COX6CP11-201ENST00000555293 229 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC106730.2-201ENST00000566641 540 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AL139041.1-201ENST00000605480 610 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC113361.1-201ENST00000606683 543 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC243830.3-201ENST00000616810 376 ntBASIC6.24□□□□□ -1.41
CBX1P83916 AC026367.3-201ENST00000619032 590 ntBASIC6.24□□□□□ -1.41
CBX1P83916 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.24□□□□□ -1.41
CBX1P83916 AC099654.15-201ENST00000639802 509 ntBASIC6.24□□□□□ -1.41
CBX1P83916 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms