Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN18P56856 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN18P56856 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN18P56856 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN18P56856 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 BIN2P1-201ENST00000504996 1530 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 EIF3EP1-201ENST00000433978 1316 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN18P56856 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 STAG3L4-201ENST00000352103 530 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 AL445238.1-204ENST00000400311 463 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 CYP4F30P-202ENST00000420048 405 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 AL451136.1-201ENST00000435399 325 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC097463.1-201ENST00000447288 481 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 PFN1P8-201ENST00000497012 543 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 KCTD9P4-201ENST00000526766 1166 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN18P56856 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC091167.5-201ENST00000605689 894 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 FAM27E2-201ENST00000619668 403 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 AC021422.1-201ENST00000621212 473 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 AC132825.8-201ENST00000640783 297 ntBASIC5.6□□□□□ -1.51
CLDN18P56856 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN18P56856 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN18P56856 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN18P56856 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN18P56856 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN18P56856 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
CLDN18P56856 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN18P56856 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 AC110373.1-201ENST00000505994 3505 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLDN18P56856 AC105749.1-201ENST00000631338 2008 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN18P56856 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN18P56856 OR11H13P-201ENST00000359695 979 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 RNA5SP433-201ENST00000364491 114 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 OR7E156P-201ENST00000400303 464 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 OR2W4P-201ENST00000406496 926 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN18P56856 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 GAPDHP34-201ENST00000432112 823 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC069154.1-201ENST00000432914 542 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 OR3D1P-201ENST00000438288 955 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 PPIAP7-201ENST00000454070 489 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC009963.3-201ENST00000458090 486 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN18P56856 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 AC090958.1-201ENST00000511122 351 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 RN7SKP35-201ENST00000517210 151 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN18P56856 AP000620.1-201ENST00000527147 504 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN18P56856 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN18P56856 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 AC023389.2-201ENST00000580031 955 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 AP001437.1-201ENST00000608783 456 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms