Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AC005297.1-201ENST00000444765 862 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AL450023.1-201ENST00000450868 751 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 GARSP1-201ENST00000570895 719 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 TAS2R6P-201ENST00000605022 826 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 AF131215.2-201ENST00000531549 1710 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SMARCA4P51532 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA4P51532 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SMARCA4P51532 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 AL159987.1-201ENST00000347911 293 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 RN7SKP115-201ENST00000363177 317 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 CYCSP12-201ENST00000437729 300 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 AC015983.1-201ENST00000441577 373 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 FAR2P1-206ENST00000449736 709 ntBASIC10.58□□□□□ -0.72
SMARCA4P51532 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA4P51532 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA4P51532 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.58□□□□□ -0.72
SMARCA4P51532 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA4P51532 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA4P51532 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA4P51532 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
SMARCA4P51532 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SMARCA4P51532 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA4P51532 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA4P51532 AL157831.2-201ENST00000564681 3095 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC10.57□□□□□ -0.72
SMARCA4P51532 AC103591.2-201ENST00000265259 766 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA4P51532 AL133270.1-201ENST00000402635 279 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA4P51532 RPL23AP27-201ENST00000415161 451 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 AL133173.1-201ENST00000423458 397 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 FABP7P2-201ENST00000429946 379 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC10.57□□□□□ -0.72
SMARCA4P51532 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.57□□□□□ -0.72
SMARCA4P51532 MIR5095-201ENST00000578844 88 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 RN7SL708P-201ENST00000580952 299 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC10.57□□□□□ -0.72
SMARCA4P51532 AL137246.2-201ENST00000613439 662 ntBASIC10.57□□□□□ -0.72
SMARCA4P51532 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA4P51532 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA4P51532 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SMARCA4P51532 ARHGAP42P2-201ENST00000416089 2140 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 AC007938.2-201ENST00000604666 2634 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA4P51532 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC10.56□□□□□ -0.72
SMARCA4P51532 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA4P51532 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 RN7SL30P-201ENST00000488416 306 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 CDC42P3-201ENST00000518493 633 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 OR4A42P-201ENST00000531397 938 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
SMARCA4P51532 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC10.56□□□□□ -0.72
SMARCA4P51532 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA4P51532 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA4P51532 AFP-201ENST00000226359 1914 ntTSL 5 BASIC10.56□□□□□ -0.72
SMARCA4P51532 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA4P51532 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA4P51532 EEF1A1P14-201ENST00000421195 1376 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SMARCA4P51532 AC011379.1-201ENST00000508713 3025 ntBASIC10.56□□□□□ -0.72
SMARCA4P51532 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC10.55□□□□□ -0.72
SMARCA4P51532 AC019185.1-201ENST00000442718 389 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 AC026254.2-201ENST00000475295 371 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 OR2AO1P-201ENST00000476497 403 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 RPL38P3-201ENST00000484463 213 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 EIF1P7-201ENST00000487533 337 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC10.55□□□□□ -0.72
SMARCA4P51532 OR4A40P-201ENST00000533878 948 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 AC104581.5-201ENST00000624171 7141 ntBASIC10.55□□□□□ -0.72
SMARCA4P51532 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMARCA4P51532 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC10.55□□□□□ -0.72
SMARCA4P51532 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SMARCA4P51532 GTF2IP4-201ENST00000453092 2054 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms