Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC092967.1-201ENST00000449016 481 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AC115223.1-201ENST00000466377 870 ntBASIC6.09□□□□□ -1.43
RAB28P51157 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.09□□□□□ -1.43
RAB28P51157 SNX18P25-201ENST00000510539 758 ntBASIC6.09□□□□□ -1.43
RAB28P51157 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.09□□□□□ -1.43
RAB28P51157 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.09□□□□□ -1.43
RAB28P51157 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.09□□□□□ -1.43
RAB28P51157 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.09□□□□□ -1.43
RAB28P51157 MIR4301-201ENST00000577203 66 ntBASIC6.09□□□□□ -1.43
RAB28P51157 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.09□□□□□ -1.43
RAB28P51157 AC009303.3-201ENST00000591103 736 ntBASIC6.09□□□□□ -1.43
RAB28P51157 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.09□□□□□ -1.43
RAB28P51157 SMIM12P1-201ENST00000603004 274 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AL683813.2-201ENST00000605245 502 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AC079791.1-201ENST00000605356 973 ntBASIC6.09□□□□□ -1.43
RAB28P51157 RPSAP75-201ENST00000605848 301 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AC073389.3-201ENST00000609434 935 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AC006924.1-201ENST00000610750 559 ntBASIC6.09□□□□□ -1.43
RAB28P51157 AC010998.3-201ENST00000613871 631 ntBASIC6.09□□□□□ -1.43
RAB28P51157 uc_338.31-201ENST00000615595 186 ntBASIC6.09□□□□□ -1.43
RAB28P51157 MTCO1P1-201ENST00000624263 1081 ntBASIC6.09□□□□□ -1.43
RAB28P51157 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.09□□□□□ -1.43
RAB28P51157 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RAB28P51157 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.09□□□□□ -1.43
RAB28P51157 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.09□□□□□ -1.43
RAB28P51157 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAB28P51157 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.09□□□□□ -1.43
RAB28P51157 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RAB28P51157 BIN2P1-201ENST00000504996 1530 ntBASIC6.09□□□□□ -1.44
RAB28P51157 AC022507.1-201ENST00000548349 1505 ntBASIC6.09□□□□□ -1.44
RAB28P51157 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.09□□□□□ -1.44
RAB28P51157 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.09□□□□□ -1.44
RAB28P51157 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RAB28P51157 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RAB28P51157 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB28P51157 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB28P51157 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 YWHAZP6-201ENST00000399764 738 ntBASIC6.08□□□□□ -1.44
RAB28P51157 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.08□□□□□ -1.44
RAB28P51157 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB28P51157 RPS7P14-201ENST00000426405 583 ntBASIC6.08□□□□□ -1.44
RAB28P51157 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 IGLV3-4-201ENST00000432300 244 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 PCNPP2-201ENST00000441651 455 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AL355355.1-201ENST00000442900 793 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 AL133351.3-201ENST00000454998 193 ntBASIC6.08□□□□□ -1.44
RAB28P51157 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 RPL5P12-201ENST00000477071 851 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC112484.3-201ENST00000505910 329 ntBASIC6.08□□□□□ -1.44
RAB28P51157 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 AC108103.1-201ENST00000511286 446 ntBASIC6.08□□□□□ -1.44
RAB28P51157 Vault.2-201ENST00000516519 98 ntBASIC6.08□□□□□ -1.44
RAB28P51157 RNA5SP441-201ENST00000516809 88 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB28P51157 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB28P51157 NPM1P5-201ENST00000557228 838 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB28P51157 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB28P51157 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB28P51157 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RAB28P51157 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB28P51157 DYNLL1P1-201ENST00000595442 269 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB28P51157 AC011497.2-201ENST00000600255 639 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB28P51157 AL683826.1-201ENST00000624104 627 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC073592.6-201ENST00000624271 415 ntBASIC6.08□□□□□ -1.44
RAB28P51157 AC111152.1-202ENST00000635848 339 ntBASIC6.08□□□□□ -1.44
RAB28P51157 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB28P51157 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms