Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC004386.1-201ENST00000393214 761 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AL132875.1-201ENST00000403623 949 ntBASIC6.55□□□□□ -1.36
LHX1P48742 SNORA77.2-201ENST00000408571 112 ntBASIC6.55□□□□□ -1.36
LHX1P48742 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.55□□□□□ -1.36
LHX1P48742 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 AC002069.1-201ENST00000429649 1159 ntBASIC6.55□□□□□ -1.36
LHX1P48742 GAPDHP34-201ENST00000432112 823 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.55□□□□□ -1.36
LHX1P48742 AC103563.5-201ENST00000455643 364 ntBASIC6.55□□□□□ -1.36
LHX1P48742 RN7SL221P-201ENST00000466190 281 ntBASIC6.55□□□□□ -1.36
LHX1P48742 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.55□□□□□ -1.36
LHX1P48742 LDHAP1-201ENST00000509421 992 ntBASIC6.55□□□□□ -1.36
LHX1P48742 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.55□□□□□ -1.36
LHX1P48742 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.55□□□□□ -1.36
LHX1P48742 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 CYCSP38-201ENST00000559840 322 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.55□□□□□ -1.36
LHX1P48742 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 AC011497.2-201ENST00000600255 639 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AC141002.1-201ENST00000607025 279 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AL021368.3-201ENST00000607119 578 ntBASIC6.55□□□□□ -1.36
LHX1P48742 MIR6778-201ENST00000617912 73 ntBASIC6.55□□□□□ -1.36
LHX1P48742 AL137067.2-201ENST00000621202 131 ntBASIC6.55□□□□□ -1.36
LHX1P48742 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.55□□□□□ -1.36
LHX1P48742 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 HDAC1P2-201ENST00000453661 1398 ntBASIC6.55□□□□□ -1.36
LHX1P48742 QRSL1P1-201ENST00000400977 1540 ntBASIC6.55□□□□□ -1.36
LHX1P48742 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 AC096921.2-201ENST00000561507 1916 ntBASIC6.54□□□□□ -1.36
LHX1P48742 CCNT2P1-201ENST00000423082 1315 ntBASIC6.54□□□□□ -1.36
LHX1P48742 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 LINC01616-201ENST00000561816 2280 ntBASIC6.54□□□□□ -1.36
LHX1P48742 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 MIR130B-202ENST00000385018 82 ntBASIC6.54□□□□□ -1.36
LHX1P48742 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 AC245096.1-201ENST00000413104 546 ntBASIC6.54□□□□□ -1.36
LHX1P48742 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 RPL12P12-201ENST00000424633 501 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AC115283.1-201ENST00000427353 400 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.54□□□□□ -1.36
LHX1P48742 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.54□□□□□ -1.36
LHX1P48742 RPS27AP3-201ENST00000453803 454 ntBASIC6.54□□□□□ -1.36
LHX1P48742 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.54□□□□□ -1.36
LHX1P48742 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.54□□□□□ -1.36
LHX1P48742 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.54□□□□□ -1.36
LHX1P48742 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.54□□□□□ -1.36
LHX1P48742 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.54□□□□□ -1.36
LHX1P48742 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 AC068768.2-201ENST00000602352 343 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AL136097.3-201ENST00000611097 505 ntBASIC6.54□□□□□ -1.36
LHX1P48742 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 RN7SL261P-201ENST00000613441 282 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 AC073488.3-201ENST00000631611 778 ntBASIC6.54□□□□□ -1.36
LHX1P48742 AC003992.1-201ENST00000635364 557 ntBASIC6.54□□□□□ -1.36
LHX1P48742 MIR1910-201ENST00000636955 80 ntBASIC6.54□□□□□ -1.36
LHX1P48742 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.54□□□□□ -1.36
LHX1P48742 RBMY1HP-201ENST00000382759 1389 ntBASIC6.54□□□□□ -1.36
LHX1P48742 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.54□□□□□ -1.36
LHX1P48742 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
LHX1P48742 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 CASC19-238ENST00000641523 1558 ntBASIC6.53□□□□□ -1.36
LHX1P48742 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
LHX1P48742 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX1P48742 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 RN7SKP240-201ENST00000410583 375 ntBASIC6.53□□□□□ -1.36
LHX1P48742 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX1P48742 ATP5LP2-201ENST00000440646 311 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms