Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 TRIM53CP-201ENST00000531490 1354 ntBASIC5.7□□□□□ -1.5
SOX2P48431 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SOX2P48431 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 AC105235.1-201ENST00000623208 1816 ntBASIC5.7□□□□□ -1.5
SOX2P48431 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 SNORA38B-201ENST00000363524 131 ntBASIC5.7□□□□□ -1.5
SOX2P48431 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 AL360271.1-201ENST00000395679 510 ntBASIC5.7□□□□□ -1.5
SOX2P48431 NHP2P2-201ENST00000396362 460 ntBASIC5.7□□□□□ -1.5
SOX2P48431 RNU2-5P-201ENST00000410533 180 ntBASIC5.7□□□□□ -1.5
SOX2P48431 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 AL359633.1-201ENST00000421403 310 ntBASIC5.7□□□□□ -1.5
SOX2P48431 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.7□□□□□ -1.5
SOX2P48431 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 PTP4A1P3-201ENST00000433661 420 ntBASIC5.7□□□□□ -1.5
SOX2P48431 LDHAP2-201ENST00000437325 985 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AC027124.1-201ENST00000440852 466 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 AL139135.2-201ENST00000445040 433 ntBASIC5.7□□□□□ -1.5
SOX2P48431 VN1R38P-201ENST00000450265 887 ntBASIC5.7□□□□□ -1.5
SOX2P48431 MTND2P6-201ENST00000455337 1030 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 AC104629.2-201ENST00000468627 598 ntBASIC5.7□□□□□ -1.5
SOX2P48431 STRADBP1-201ENST00000478954 1281 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 AC026407.1-201ENST00000518369 204 ntBASIC5.7□□□□□ -1.5
SOX2P48431 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 AC107952.1-201ENST00000524200 376 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.7□□□□□ -1.5
SOX2P48431 UBTFL9-201ENST00000534504 1148 ntBASIC5.7□□□□□ -1.5
SOX2P48431 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.7□□□□□ -1.5
SOX2P48431 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SOX2P48431 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX2P48431 AL353807.4-201ENST00000604995 257 ntBASIC5.7□□□□□ -1.5
SOX2P48431 AC024255.1-201ENST00000614376 102 ntBASIC5.7□□□□□ -1.5
SOX2P48431 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 AC099654.8-201ENST00000637757 681 ntBASIC5.7□□□□□ -1.5
SOX2P48431 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.7□□□□□ -1.5
SOX2P48431 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.7□□□□□ -1.5
SOX2P48431 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SOX2P48431 AL512353.3-201ENST00000417517 1326 ntBASIC5.7□□□□□ -1.5
SOX2P48431 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.7□□□□□ -1.5
SOX2P48431 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SOX2P48431 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SOX2P48431 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SOX2P48431 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX2P48431 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX2P48431 AC017002.4-201ENST00000604721 1525 ntBASIC5.69□□□□□ -1.5
SOX2P48431 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX2P48431 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX2P48431 MTCO1P4-201ENST00000520516 1409 ntBASIC5.69□□□□□ -1.5
SOX2P48431 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 IMMTP1-201ENST00000435590 2219 ntBASIC5.69□□□□□ -1.5
SOX2P48431 AC100810.3-201ENST00000633189 2240 ntBASIC5.69□□□□□ -1.5
SOX2P48431 OFD1P17-201ENST00000437639 3018 ntBASIC5.69□□□□□ -1.5
SOX2P48431 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX2P48431 RN7SKP189-201ENST00000365042 330 ntBASIC5.69□□□□□ -1.5
SOX2P48431 RNA5SP427-201ENST00000365323 119 ntBASIC5.69□□□□□ -1.5
SOX2P48431 LCN1P2-201ENST00000372030 223 ntBASIC5.69□□□□□ -1.5
SOX2P48431 RNU6-1257P-201ENST00000384625 110 ntBASIC5.69□□□□□ -1.5
SOX2P48431 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.69□□□□□ -1.5
SOX2P48431 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX2P48431 GYG1P2-201ENST00000426437 1006 ntBASIC5.69□□□□□ -1.5
SOX2P48431 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX2P48431 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX2P48431 SNRPBP1-201ENST00000443634 282 ntBASIC5.69□□□□□ -1.5
SOX2P48431 RPL7AP71-201ENST00000451120 739 ntBASIC5.69□□□□□ -1.5
SOX2P48431 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX2P48431 ST13P21-201ENST00000453250 1098 ntBASIC5.69□□□□□ -1.5
SOX2P48431 RPL26P30-201ENST00000453533 435 ntBASIC5.69□□□□□ -1.5
SOX2P48431 OR7E7P-201ENST00000455678 1012 ntBASIC5.69□□□□□ -1.5
SOX2P48431 MTCO1P31-201ENST00000506355 492 ntBASIC5.69□□□□□ -1.5
SOX2P48431 AC114322.1-201ENST00000506771 926 ntBASIC5.69□□□□□ -1.5
SOX2P48431 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX2P48431 Vault.2-201ENST00000516519 98 ntBASIC5.69□□□□□ -1.5
SOX2P48431 HMGB1P46-201ENST00000520062 610 ntBASIC5.69□□□□□ -1.5
SOX2P48431 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX2P48431 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX2P48431 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.69□□□□□ -1.5
SOX2P48431 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.69□□□□□ -1.5
SOX2P48431 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX2P48431 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX2P48431 AL162632.2-201ENST00000553933 399 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms