Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VARSP26640 RNU6-780P-201ENST00000391030 104 ntBASIC8.09□□□□□ -1.11
VARSP26640 SNORD86-201ENST00000391196 86 ntBASIC8.09□□□□□ -1.11
VARSP26640 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AC234778.1-201ENST00000399253 370 ntBASIC8.09□□□□□ -1.11
VARSP26640 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 CALM2P3-201ENST00000400429 449 ntBASIC8.09□□□□□ -1.11
VARSP26640 SNORA73.3-201ENST00000410213 189 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AC092170.1-201ENST00000440211 356 ntBASIC8.09□□□□□ -1.11
VARSP26640 TRAPPC2P8-201ENST00000440676 396 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 RBMY3AP-201ENST00000449381 1145 ntBASIC8.09□□□□□ -1.11
VARSP26640 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 RPL30P9-201ENST00000465586 330 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC096576.1-201ENST00000489014 359 ntBASIC8.09□□□□□ -1.11
VARSP26640 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 OR5M14P-201ENST00000506803 618 ntBASIC8.09□□□□□ -1.11
VARSP26640 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 AC013701.1-201ENST00000522657 465 ntBASIC8.09□□□□□ -1.11
VARSP26640 KCTD9P4-201ENST00000526766 1166 ntBASIC8.09□□□□□ -1.11
VARSP26640 OR4A7P-201ENST00000531463 910 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC005832.3-201ENST00000537929 631 ntBASIC8.09□□□□□ -1.11
VARSP26640 AK6P1-201ENST00000540219 478 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC092747.2-201ENST00000545069 983 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC093012.1-202ENST00000549403 582 ntBASIC8.09□□□□□ -1.11
VARSP26640 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 AL023284.4-201ENST00000564248 374 ntBASIC8.09□□□□□ -1.11
VARSP26640 PCMTD1P2-201ENST00000565017 355 ntBASIC8.09□□□□□ -1.11
VARSP26640 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 AC006120.1-201ENST00000579375 546 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 SRP68P1-201ENST00000584247 269 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.09□□□□□ -1.11
VARSP26640 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 BNIP3P22-201ENST00000593399 556 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC012640.3-201ENST00000607847 430 ntBASIC8.09□□□□□ -1.11
VARSP26640 AL592295.2-201ENST00000612578 206 ntBASIC8.09□□□□□ -1.11
VARSP26640 OR8G7P-201ENST00000616658 848 ntBASIC8.09□□□□□ -1.11
VARSP26640 AL160413.1-201ENST00000622780 310 ntBASIC8.09□□□□□ -1.11
VARSP26640 AC024580.1-201ENST00000623020 674 ntBASIC8.09□□□□□ -1.11
VARSP26640 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.09□□□□□ -1.11
VARSP26640 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.09□□□□□ -1.11
VARSP26640 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC8.09□□□□□ -1.11
VARSP26640 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.09□□□□□ -1.11
VARSP26640 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
VARSP26640 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARSP26640 AF131215.2-201ENST00000531549 1710 ntBASIC8.09□□□□□ -1.11
VARSP26640 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.09□□□□□ -1.11
VARSP26640 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.09□□□□□ -1.11
VARSP26640 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.09□□□□□ -1.12
VARSP26640 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
VARSP26640 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC018880.1-201ENST00000418898 1319 ntBASIC8.08□□□□□ -1.12
VARSP26640 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 RNU4-79P-201ENST00000362764 141 ntBASIC8.08□□□□□ -1.12
VARSP26640 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms