Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
POLR2AP24928 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
POLR2AP24928 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
POLR2AP24928 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.15□□□□□ -1.26
POLR2AP24928 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
POLR2AP24928 OR6K3-202ENST00000368146 996 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 GABARAPL3-201ENST00000412799 354 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 AC005033.1-201ENST00000428904 813 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.15□□□□□ -1.26
POLR2AP24928 LRRC37A14P-201ENST00000452297 462 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 SDC4P-201ENST00000453285 601 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 BX510359.5-201ENST00000515651 304 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 EIF4A2P5-201ENST00000529914 499 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 AC090330.1-201ENST00000588646 764 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 MIR7155-201ENST00000615925 56 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 C4BPAP1-201ENST00000415474 1893 ntBASIC7.15□□□□□ -1.26
POLR2AP24928 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
POLR2AP24928 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.15□□□□□ -1.26
POLR2AP24928 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
POLR2AP24928 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
POLR2AP24928 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
POLR2AP24928 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
POLR2AP24928 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.15□□□□□ -1.27
POLR2AP24928 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.15□□□□□ -1.27
POLR2AP24928 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.15□□□□□ -1.27
POLR2AP24928 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC7.15□□□□□ -1.27
POLR2AP24928 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.15□□□□□ -1.27
POLR2AP24928 RPS12P17-201ENST00000438591 377 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.15□□□□□ -1.27
POLR2AP24928 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.15□□□□□ -1.27
POLR2AP24928 RN7SL57P-201ENST00000493687 290 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.15□□□□□ -1.27
POLR2AP24928 NDUFB5P1-201ENST00000508134 564 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 SUMO2P7-201ENST00000511179 285 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.15□□□□□ -1.27
POLR2AP24928 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.15□□□□□ -1.27
POLR2AP24928 AL132657.2-201ENST00000564417 358 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.15□□□□□ -1.27
POLR2AP24928 AP005901.4-201ENST00000577336 569 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 AC009948.4-201ENST00000604692 675 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 AF117829.2-201ENST00000619538 361 ntBASIC7.15□□□□□ -1.27
POLR2AP24928 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
POLR2AP24928 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
POLR2AP24928 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
POLR2AP24928 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
POLR2AP24928 AC022417.1-201ENST00000624768 1303 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
POLR2AP24928 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
POLR2AP24928 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.14□□□□□ -1.27
POLR2AP24928 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
POLR2AP24928 AL162456.1-201ENST00000634535 2006 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.14□□□□□ -1.27
POLR2AP24928 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
POLR2AP24928 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
POLR2AP24928 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.14□□□□□ -1.27
POLR2AP24928 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.14□□□□□ -1.27
POLR2AP24928 RN7SKP128-201ENST00000364270 303 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 MIR1286-201ENST00000408112 78 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
POLR2AP24928 CFL1P1-202ENST00000432948 411 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 FTH1P20-201ENST00000434913 548 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AL139156.3-201ENST00000454802 394 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AL157777.1-201ENST00000468100 304 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AC095057.1-201ENST00000507583 168 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AC010343.2-201ENST00000510162 224 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.14□□□□□ -1.27
POLR2AP24928 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.14□□□□□ -1.27
POLR2AP24928 IGLV3-30-201ENST00000524362 298 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AC025423.2-201ENST00000537570 439 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.14□□□□□ -1.27
POLR2AP24928 AC015818.6-201ENST00000584274 634 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
POLR2AP24928 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.14□□□□□ -1.27
POLR2AP24928 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.14□□□□□ -1.27
POLR2AP24928 MIR6748-201ENST00000610433 71 ntBASIC7.14□□□□□ -1.27
POLR2AP24928 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms