Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 AP000866.6-201ENST00000638898 3579 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 FBXL21-201ENST00000297158 1305 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL512353.3-201ENST00000417517 1326 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 AL136100.1-201ENST00000407696 330 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL139415.1-201ENST00000424862 352 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 FHP1-201ENST00000442741 703 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 AL354872.1-201ENST00000456361 967 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.88□□□□□ -1.15
HMGB1P09429 PHBP2-201ENST00000532859 806 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 AC091133.5-201ENST00000603088 301 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL078624.2-201ENST00000605063 554 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL513218.1-201ENST00000606527 391 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AL137000.1-201ENST00000610528 1244 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 WBP1LP8-201ENST00000617401 327 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AC005277.2-201ENST00000617898 390 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AC061999.1-201ENST00000624454 177 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 AC062022.1-201ENST00000451026 1684 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HMGB1P09429 SAGE3P-201ENST00000619800 1635 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.88□□□□□ -1.15
HMGB1P09429 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.88□□□□□ -1.15
HMGB1P09429 ZNF733P-202ENST00000444809 1573 ntBASIC7.88□□□□□ -1.15
HMGB1P09429 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HMGB1P09429 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HMGB1P09429 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HMGB1P09429 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HMGB1P09429 RNA5SP382-201ENST00000363355 112 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 SNORA38B-201ENST00000363524 131 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 RNU1-46P-201ENST00000384425 164 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 MIR27A-201ENST00000385073 78 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HMGB1P09429 RANP4-201ENST00000413361 655 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.87□□□□□ -1.15
HMGB1P09429 Z68868.1-201ENST00000429048 544 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
HMGB1P09429 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.87□□□□□ -1.15
HMGB1P09429 AL691517.1-201ENST00000440833 1235 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.87□□□□□ -1.15
HMGB1P09429 OR9N1P-202ENST00000494289 481 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AC023818.1-201ENST00000498379 384 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.87□□□□□ -1.15
HMGB1P09429 OR52K3P-201ENST00000531655 943 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.87□□□□□ -1.15
HMGB1P09429 AC023158.1-201ENST00000561632 1025 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.87□□□□□ -1.15
HMGB1P09429 MTCO3P22-201ENST00000603219 784 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 CR589904.2-201ENST00000612533 440 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AL122125.1-201ENST00000616999 600 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AL035425.4-201ENST00000624509 1063 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 AC016745.2-201ENST00000608834 3443 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.87□□□□□ -1.15
HMGB1P09429 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.87□□□□□ -1.15
HMGB1P09429 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.87□□□□□ -1.15
HMGB1P09429 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.87□□□□□ -1.15
HMGB1P09429 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HMGB1P09429 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms