Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC4P09017 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 RPS7P8-201ENST00000418311 581 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 RPL6P21-201ENST00000418672 846 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 RPL12P12-201ENST00000424633 501 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC009237.1-201ENST00000442127 744 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC4P09017 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC4P09017 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXC4P09017 AP003080.1-202ENST00000526526 915 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC4P09017 AP004609.2-201ENST00000532177 190 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 NANOGNBP2-201ENST00000544753 553 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC067773.1-201ENST00000603284 1094 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AC073333.2-201ENST00000603589 769 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AC141002.1-201ENST00000607025 279 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 AC096861.1-201ENST00000616652 240 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 OR7A1P-202ENST00000641542 1158 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 TTC41P-205ENST00000551270 3963 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC4P09017 LCOR-201ENST00000286067 4542 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC119674.1-213ENST00000641177 1386 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXC4P09017 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 AC011369.2-201ENST00000624423 1567 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC4P09017 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC4P09017 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 RNU105B-201ENST00000364478 208 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 AL132875.1-201ENST00000403623 949 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.06□□□□□ -1.44
HOXC4P09017 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 FTLP8-201ENST00000446770 267 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC4P09017 AC005077.1-201ENST00000449226 375 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 AC090568.1-201ENST00000509499 856 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.06□□□□□ -1.44
HOXC4P09017 AP005639.1-201ENST00000526939 192 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 MIR4301-201ENST00000577203 66 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
HOXC4P09017 AL137067.2-201ENST00000621202 131 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 AC063952.1-203ENST00000634410 658 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 AC005618.1-201ENST00000606901 3148 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 AL157831.2-201ENST00000564681 3095 ntBASIC6.06□□□□□ -1.44
HOXC4P09017 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXC4P09017 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC4P09017 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
HOXC4P09017 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC4P09017 AC008627.1-201ENST00000517511 1704 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms