Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 RPL21P42-201ENST00000488408 464 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL390198.2-201ENST00000510553 222 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SSU72P6-201ENST00000532644 488 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC020916.2-201ENST00000591242 360 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL031429.2-201ENST00000602605 649 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC099777.1-201ENST00000603779 1070 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 LSM1P2-201ENST00000604911 322 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL139041.1-201ENST00000605480 610 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC023206.1-201ENST00000605824 298 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC093635.1-201ENST00000609028 555 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC006924.1-201ENST00000610750 559 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL121782.1-201ENST00000611242 413 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 PTCHD3P1-201ENST00000612350 537 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC007786.3-201ENST00000615154 596 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC009283.1-201ENST00000615852 645 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC106782.7-201ENST00000624024 418 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC133555.5-201ENST00000624430 418 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC090220.1-201ENST00000593078 1699 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL161756.3-201ENST00000641216 2071 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PARP4P2-201ENST00000446672 3326 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RPL11P3-201ENST00000395256 523 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RPL5P20-201ENST00000403848 896 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL117344.1-201ENST00000407196 616 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 NFU1P1-201ENST00000413128 774 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL663074.2-201ENST00000440621 479 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL096803.1-201ENST00000456921 1021 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RN7SL352P-201ENST00000466002 277 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 CBX5P1-201ENST00000468470 561 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PPP1R2P6-201ENST00000478565 588 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC079080.1-201ENST00000479841 822 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RPS10P28-201ENST00000480396 498 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC114940.1-201ENST00000512162 1265 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 HMGN2P47-201ENST00000559378 272 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ANP32BP1-202ENST00000568553 737 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC091304.5-201ENST00000568969 158 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 RN7SL657P-201ENST00000582431 293 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC006115.2-201ENST00000596823 202 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 AC125336.1-201ENST00000508893 2827 ntBASIC4.6□□□□□ -1.67
HLA-DQA1P01909 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms