Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC091768.1-201ENST00000609258 930 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AC079395.2-201ENST00000610982 737 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 OR8G3P-202ENST00000641572 1255 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 MIR193BHG-214ENST00000641765 509 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PDGFBP01127 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFBP01127 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
PDGFBP01127 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 WDR95P-201ENST00000425638 1542 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 RN7SKP271-201ENST00000410528 320 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 AC006455.6-201ENST00000426192 893 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 RN7SL870P-201ENST00000460111 296 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 SIAH1P1-201ENST00000479411 923 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AC055733.3-201ENST00000505214 523 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 NDUFB5P1-201ENST00000508134 564 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFBP01127 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 CYCSP22-201ENST00000517555 339 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AC021269.1-201ENST00000526860 705 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFBP01127 RPL12P48-201ENST00000605620 304 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 AC116651.1-201ENST00000609724 556 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFBP01127 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
PDGFBP01127 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFBP01127 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFBP01127 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PDGFBP01127 AP005139.1-201ENST00000580702 1647 ntBASIC6.36□□□□□ -1.39
PDGFBP01127 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 AC007342.5-201ENST00000571340 2142 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC137056.2-201ENST00000624055 1958 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFBP01127 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFBP01127 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 AP000534.2-201ENST00000412729 568 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFBP01127 CYP4F32P-201ENST00000426492 504 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 RPL23AP68-201ENST00000480924 445 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC090616.1-201ENST00000583895 447 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 AC107993.1-201ENST00000591343 684 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFBP01127 AL591167.1-201ENST00000607321 456 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFBP01127 AC087269.2-201ENST00000641764 975 ntBASIC6.35□□□□□ -1.39
PDGFBP01127 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFBP01127 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFBP01127 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFBP01127 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.35□□□□□ -1.39
PDGFBP01127 BX322650.1-201ENST00000332359 2143 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms