Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 AC020656.2-201ENST00000613291 5309 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 AC022164.1-201ENST00000568767 2673 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.84□□□□□ -1.47
SCN2BO60939 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 AC003045.1-201ENST00000398779 713 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AL121977.1-201ENST00000401636 979 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.84□□□□□ -1.47
SCN2BO60939 AC112492.2-201ENST00000432774 1030 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 EMC3-AS1-205ENST00000438698 534 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 RPS4XP17-201ENST00000479057 754 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC093816.1-201ENST00000515076 913 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 RNA5SP206-201ENST00000516703 121 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.84□□□□□ -1.47
SCN2BO60939 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 AC244502.2-201ENST00000543361 851 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.84□□□□□ -1.47
SCN2BO60939 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 RN7SL66P-201ENST00000582099 264 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 AL583832.1-201ENST00000603227 784 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC022001.1-201ENST00000605193 268 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 AC068213.1-201ENST00000625124 226 ntBASIC5.84□□□□□ -1.47
SCN2BO60939 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.84□□□□□ -1.47
SCN2BO60939 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCN2BO60939 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SCN2BO60939 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCN2BO60939 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SCN2BO60939 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SCN2BO60939 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.84□□□□□ -1.48
SCN2BO60939 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCN2BO60939 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SCN2BO60939 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 AC092724.1-201ENST00000624623 3397 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SCN2BO60939 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 AL731534.1-201ENST00000434711 269 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN2BO60939 RPEP4-201ENST00000437636 602 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 PPIAP10-201ENST00000438675 458 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 ARMC4P1-201ENST00000438905 707 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN2BO60939 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC015524.1-201ENST00000491585 472 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 AC113191.1-201ENST00000517759 403 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC092865.1-201ENST00000544395 1023 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.83□□□□□ -1.48
SCN2BO60939 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN2BO60939 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
SCN2BO60939 AL589765.6-201ENST00000601909 549 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 SNORA74.4-201ENST00000607595 199 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 AL353684.1-201ENST00000622677 1120 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 AC012078.1-201ENST00000405035 1646 ntBASIC5.83□□□□□ -1.48
SCN2BO60939 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN2BO60939 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN2BO60939 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.83□□□□□ -1.48
SCN2BO60939 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCN2BO60939 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.83□□□□□ -1.48
SCN2BO60939 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms